| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4484 |
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| Symbol | |
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| ID | 8335838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5110848 |
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| End bp | 5111411 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957586 |
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| Product | Uracil-DNA glycosylase superfamily |
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| Protein accession | YP_003115188 |
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| Protein GI | 256393624 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0947476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.892156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCT ACACCCCCGA AGACCTCGCC GCCGCGAACG GCCGCACCCT CGCCGACGTC
ATCGCCCCCC ACCTGAACGT CCTGTTCTGC GGCATCAACC CCGGCCTCCT GTCCGCCCTC
ACCGGCCACC ACTTCGCCCG CCCCGGCAAC CGCTTCTGGC CCGCCCTCCA CCGCTCCGGC
TTCACCCCCC GCCAACTAGC CCCCCACGAG CAAGACCACC TGATCACCCT CGGCCTGGGC
ATCACCAACG TCGTCCCCCG CGCCACCGCC GGCGCCGCCG AACTACGCGC CGAGGAGTAC
CGCACCGGCG GCGAGGCACT GCGCGCGAAG GTCGCCGAGT ACCGGCCACG CTGGCTAGCG
ATCGTCGGCA TCGGTGCGTA CCGAGTCGCC TTCGACGCGC CGAAGGCGGT AATGGGACGT
CAGGAGCTCA CGCTCGGGGA GACCGGGGTG TGGGTGCTGC CCAATCCCAG CGGCTTGAAC
GCGCACTACA ACGTCGACAC GCTCGCCGCG GCGTACGCCG AGCTGCGGGT GGTCGTGGAG
GGCGAGGGGG CGGCGGCGTC ATAA
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| Protein sequence | MARYTPEDLA AANGRTLADV IAPHLNVLFC GINPGLLSAL TGHHFARPGN RFWPALHRSG
FTPRQLAPHE QDHLITLGLG ITNVVPRATA GAAELRAEEY RTGGEALRAK VAEYRPRWLA
IVGIGAYRVA FDAPKAVMGR QELTLGETGV WVLPNPSGLN AHYNVDTLAA AYAELRVVVE
GEGAAAS
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