| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4478 |
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| Symbol | |
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| ID | 8335832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5103965 |
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| End bp | 5107693 |
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| Gene Length | 3729 bp |
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| Protein Length | 1242 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957580 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_003115182 |
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| Protein GI | 256393618 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.397218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCGCG ACGGATCCAA GGAGCCCGAC GCGCTCCTGC TCGAGGCGGG AAAATACTTC
CGCCGCGGCA GCACCGCCGA CGACCTGCAC AGCGTCCGCT ACGAAGGCGG CCGCGCCGGC
GACGTCTTCT ACCGCGACCG CTGGAGCCAC GACAAGATCG TCTACTCCAC CCACGGCGTC
AACTGCACCG GCTCGTGCCG CTGGAAGGTC TACGTCAAAG ACGGCATCAT CACCTGGGAG
ACGCAGGCCA CGGATTATCC CTCCGTCGGC CCGGACAGCC CTGAATACGA ACCCCGCGGC
TGCCCGCGCG GCGCCTCCTT CTCCTGGTAC ACCTACTCCC CCTCCCGCGT GCGCCACCCC
TACATCCGCG GCGTGCTGCT GGAGCAGTTC CGTGCCGCCA GAGCCGCCGC CGGCGGAGAC
CCCGTCGCCG CCTGGGCCGC GATCCAAGCA GACCCCGAAC TCCGCCGCGC CTACCAGCAA
GCCCGCGGCA AAGGCGGCCT GGTGCGCGCC ACCTGGGACG AAGCCGTCGA CATCATCGCC
GCGGCGCACG TGCACACGAT CAAAGAACAC GGCCCGGACC GCATCGCCGG CTTCTCCCCC
ATCCCGGCCA TGTCCATGGT CTCCCACGCC GCCGGCGCCC GCTTCCACTC CCTCATCGGC
GCCACGATGC TGTCCTTCTA CGACTGGTAC GCCGACCTCC CCGTCGCCTC CCCGCAGGTC
TTCGGCGACC AGACCGACGT CCCGGAGTCC GGCGACTGGT GGGACGCCGC CTACCTGATC
ATGTGGGGCT CCAACGTCTC GGTCACCCGA ACCCCCGACG CGCACTGGAT GGCCGAGGCG
CGCTACCGCG GCCAGAAGGT CGTGGTCGTC GCCCCGGACT ACGCCGACAA CGCCAAGTTC
GCCGACGAAT GGCTGCACCC CCACCCCGGC ACCGACGCCG CCCTGGCCAT CGCCATGGGG
CATGTCGTCC TGAAGGAACA CTTCGTCGAC ACCCGCAACG AGTTCTTCGA CTCCTACGTC
AAACAGTTCA CCGACCTGCC GTTCCTGGTC ACATTGAGCG AGCACGACAA GGGCGGCTAC
TACGTCCCCG ACAAGTTCCT GCGCGCCGCC GACCTCGACG GCAGCGCCGA CGGCGACGCC
ACCGCGGCCG ACGGCGCCGC CTGGAAGACC GTCGTCCTGG ACACCGCGAC CGGCAACCCC
GTCGTCCCCA ACGGCTCCAT CGGCTTCCGC TGGGGCGAAA GCGGCGAAGG CCACTGGAAT
CTGGACCTCG GCGACGTCGA ACCCCGCCTG AGCCTGCTCG GCCTGCCGCA GGCCATCGGC
GCCGAGGTCC TGCTCCCCCG CTTCGACACC GACGGCGGCG CGCACGGCCA GGGCCGCGGC
GAGATCCACA CCCGCGGCGT CCCGGCGATC CGGCTGCGCC CCGACGGACC GCTCGTCACC
ACCGTGTTCG ACCTCTTACT CGCCCAGTAC GGCGTCGCCC GCGCCGACCT GCCCGGCATC
TGGCCCACCG GTTACGACGA CGCCACCGCC CCCGGCACGC CGGCGTGGGC CGAGGCGCAG
ACCTCCGTCC CGGCCCGGCT CGCGGTGAAG ATCGCCCGCG AATTCGCCGA CACCGCCACG
AAATCCGGCG GCCGCTGCAT GATCCTCATG GGCGCCGGCA CCAACCACTG GTTCCACTCC
GAAACCATCT ACCGGTCCTT CCTGGCGCTG CTCACCCTCA CCGGCTGCCA AGGACGCAAC
GGCGGCGGCT GGGCCCACTA CGTCGGCCAG GAGAAATGCC GCCCCTCCAC CGGCTGGGCC
ACCCTGGCCT CCGCCAACGA CTGGTCGCGC CCGCCGCGGC AAGCCATCGG CGCCGGCTTC
TTCTACCTGA ACACCGATCA GTGGCGCTAC GACCAGTTCC GCACCGAAGT CCTCACCTCC
CCGCTCGCCT CCGGCGCGAT GAACGGCATG GCCGGCGCCG ACTGCCTGGC ACGCGCCGCA
CGCCTGGGCT GGATGCCGTC CTACCCGACA TTCGACCGGA ACCCCCTGGA CCTCGCCGAC
GAGGCGAAAG CCGCCGGCAA GGAGGCGGCG GCGCACGTCG TCGAGGAGCT GAAAGCCGGA
CGGCTCGGCT TCGCCTGCGA GGACCCCGAC GCGCCGCAGA ACTGGCCGCG CATCATGACG
TTGTGGCGCG CCAACCTGCT CGGCTCCTCT GCCAAGGGCG CGGAGTACTT CGCCAAGCAC
CTGTTGGGGA CCCACTCCTC GCTCAGCGCC GAAGAAGCAC ACGAAGACGT GCGCCCTCGC
GACGTGAAAT GGCATGAGGA AGCGCCCGAA GGCAAGCTCG ATCTGTTGCT GTCACTGGAT
TTCCGGATGA CGTCCTCCGC GCTGTTGTCG GATGTCGTGC TGCCGGCAGC CACTTGGTAT
GAGAAGCACG ACCTGTCCTC CACGGACATG CATCCGTTCA TCCACTCCTT CAGCCCGGCC
GTCGACCCGC CCTGGCAGGC ACGCACCGAC TTCGACGCGT TCCACGCCAT CGCCAAACGC
CTCAGCGAAC TGGCTGTCGG ACGCCTGGAT ACCCGCCACG ACATCGTCGC CGCGCCTCTG
CAACACGACA CTCCCGGAGA GATCGCCCAG CCCGGCGGCG TCGTCCTGGA CTGGCGGCTC
GGCGAATGCG AACCGATGCC GGGCACGACG ATGCCCGCCC TGGTCGCCGT CGAACGCGAT
TACACCGCGA TCGCCGCGAA AATGGCGTCG CTCGGACCGA ACGTGGAGAA GCTCGGGCTG
CCTGTCAAAG GCCTGAAATT CGTGCCCGAC GAAGAAGTCA CCGCGCTCAA AGCCCTCAAC
GGCACAGCAC GCGGCGGGCC GGCCGACGGA CGTCCGCTGA TCGACACCGG TGTCAAAGCC
TGCAACACCA TCCTGCGCCT GTCCGGCACC AGTAACGGAC GCCTTGCCGT CCAAGGCTTC
CGGCAACTCG AGAAGCGCGT CGGCAAAGAG TTCGCGCACC TGGCTGCCGA ACACGAAGGC
AAGCGGATCA CCTACGCCGA CACGCAAGCC GCGCCGGTAC CCGTCATCAC CTCACCGGAA
TGGTCCGGCA GCGAATCCGG CGGACGCCGC TACGCGCCCT TCACCCTGAA CACCGAGCAC
CTCAAGCCCT GGCACACGCT CACCGGACGG CAGCACTTCT TCCTCGACCA CGACTGGATC
CACGAATTCG GCGAAGCCCT CCCGGTCTAC CGGCCGCCGC TGGACATGAA CCAGCTGTTC
GGCGAGCCAC GGCTCGGGCC CGACGGGCAG AACGAGGTCA CCGTCCGCTA TCTCACACCG
CACAACAAGT GGTCCATCCA CTCCGAGTAC CAGGACAACC TGTTCATGCT CTCGCTCTCG
CGCGGCGGGC AGGTCATCTG GATGTCGGAC CAGGACGCCG CGTCGATCGG CGTGCGGGAC
AACGACTGGA TCGAGGCGGT CAACCGCAAC GGCGTCGTCG TCGCCCGCGC CATCGTGTCG
CACCGGATGC CCAAGGGGAC CGTCTACATG CACCACGCCC AAGACCGGAC CGTCGGCGTG
CCGAAGACGC AGAAGACCGG CAAGCGCGGC GGGATTCACA ACTCCCTGAC TCGCGTCATG
CTCAAGCCCA CGCACCTGAT CGGCGGCTAC GCGCAACTGT CCTGGGCGTT CAACTACCTC
GGGCCGACCG GCAACCAGCG CGACGAGGTC ACCGTCATCC GCCGCCGCTC GCAGGAGGTG
CAGTACTGA
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| Protein sequence | MPRDGSKEPD ALLLEAGKYF RRGSTADDLH SVRYEGGRAG DVFYRDRWSH DKIVYSTHGV
NCTGSCRWKV YVKDGIITWE TQATDYPSVG PDSPEYEPRG CPRGASFSWY TYSPSRVRHP
YIRGVLLEQF RAARAAAGGD PVAAWAAIQA DPELRRAYQQ ARGKGGLVRA TWDEAVDIIA
AAHVHTIKEH GPDRIAGFSP IPAMSMVSHA AGARFHSLIG ATMLSFYDWY ADLPVASPQV
FGDQTDVPES GDWWDAAYLI MWGSNVSVTR TPDAHWMAEA RYRGQKVVVV APDYADNAKF
ADEWLHPHPG TDAALAIAMG HVVLKEHFVD TRNEFFDSYV KQFTDLPFLV TLSEHDKGGY
YVPDKFLRAA DLDGSADGDA TAADGAAWKT VVLDTATGNP VVPNGSIGFR WGESGEGHWN
LDLGDVEPRL SLLGLPQAIG AEVLLPRFDT DGGAHGQGRG EIHTRGVPAI RLRPDGPLVT
TVFDLLLAQY GVARADLPGI WPTGYDDATA PGTPAWAEAQ TSVPARLAVK IAREFADTAT
KSGGRCMILM GAGTNHWFHS ETIYRSFLAL LTLTGCQGRN GGGWAHYVGQ EKCRPSTGWA
TLASANDWSR PPRQAIGAGF FYLNTDQWRY DQFRTEVLTS PLASGAMNGM AGADCLARAA
RLGWMPSYPT FDRNPLDLAD EAKAAGKEAA AHVVEELKAG RLGFACEDPD APQNWPRIMT
LWRANLLGSS AKGAEYFAKH LLGTHSSLSA EEAHEDVRPR DVKWHEEAPE GKLDLLLSLD
FRMTSSALLS DVVLPAATWY EKHDLSSTDM HPFIHSFSPA VDPPWQARTD FDAFHAIAKR
LSELAVGRLD TRHDIVAAPL QHDTPGEIAQ PGGVVLDWRL GECEPMPGTT MPALVAVERD
YTAIAAKMAS LGPNVEKLGL PVKGLKFVPD EEVTALKALN GTARGGPADG RPLIDTGVKA
CNTILRLSGT SNGRLAVQGF RQLEKRVGKE FAHLAAEHEG KRITYADTQA APVPVITSPE
WSGSESGGRR YAPFTLNTEH LKPWHTLTGR QHFFLDHDWI HEFGEALPVY RPPLDMNQLF
GEPRLGPDGQ NEVTVRYLTP HNKWSIHSEY QDNLFMLSLS RGGQVIWMSD QDAASIGVRD
NDWIEAVNRN GVVVARAIVS HRMPKGTVYM HHAQDRTVGV PKTQKTGKRG GIHNSLTRVM
LKPTHLIGGY AQLSWAFNYL GPTGNQRDEV TVIRRRSQEV QY
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