Gene Caci_4476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4476 
Symbol 
ID8335830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5101714 
End bp5102385 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID644957578 
Productnitrate reductase molybdenum cofactor assembly chaperone 
Protein accessionYP_003115180 
Protein GI256393616 
COG category[C] Energy production and conversion 
COG ID[COG2180] Nitrate reductase delta subunit 
TIGRFAM ID[TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.345836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGGG TTTCCGGAAA CGGCGCCCCG ATCGGGCGGC GGGAGCAGGT GGTGCTTCGG 
GCGGCTGCGC ACCTGCTCGA CTATCCCGAT GCGGCCTGGC GGGAGCGGCT GCCGCTGGTG
CGGTCGGCGC TCGCGGCGGT CGGCGGTGGG GCGGCGCGGA CGCTGGTGAC GTTCGTGGAT
CAGGCCTCGG CGATGCCGGC GGCGGAGGCG ACTGCGCACT ACGTCGAGGT GTTCGACTTC
AAGAACCGGC ACAGCCTGTA TCTGACGTGG TGGCTGGACG GGGACACGCG GCGTCGGGGT
ATGTCGTTGG TGGAGCTCAA GGCGGCGTTC CGCGAGGCGG GGTTCGAGTT CGTCGAGGCG
GAGCTTCCGG ACTATCTGCC GGTCGTGCTG GAGTTCAGCG CGGTGAGCGG GGACCTCGGG
CTGTTGGTGC GTCACCGGCC CGGGTTGGAG CTGCTGCGGT TGGCGTTGGC GGAGCACGGG
ACCGCGTATG CCGCGGTGGT GGAGGCGGTC TGTTCCACGC TGCCGGGCGC TTCGCCGAAG
GATCGCGCCG CCGCGCGGGC GCTGGCTGCC GCCGGGCCGC CGCGCGAGAC GGTCGGGCTG
GATCCGGACA CCGCGGCGCT GCGTCCGTAT GGCCATCTCG ACCTGCTGCC TGTACTGGCG
CCCGACCGTT AG
 
Protein sequence
MGRVSGNGAP IGRREQVVLR AAAHLLDYPD AAWRERLPLV RSALAAVGGG AARTLVTFVD 
QASAMPAAEA TAHYVEVFDF KNRHSLYLTW WLDGDTRRRG MSLVELKAAF REAGFEFVEA
ELPDYLPVVL EFSAVSGDLG LLVRHRPGLE LLRLALAEHG TAYAAVVEAV CSTLPGASPK
DRAAARALAA AGPPRETVGL DPDTAALRPY GHLDLLPVLA PDR