Gene Caci_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4475 
Symbol 
ID8335829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5100979 
End bp5101704 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID644957577 
Productrespiratory nitrate reductase, gamma subunit 
Protein accessionYP_003115179 
Protein GI256393615 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.323862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACGT TCCTGTGGGG CGCGCTGCCC TACATCGCCA TCGCGATCCT GATCACCGGG 
CTGGTGTGGC GCTACCGGTA TGACAAGTTC GGGTGGACGA CGCGCTCCTC GGGGAGCTAC
GAGCGGCGGA TTCTGAACAT CGCCTCGCCG ATGTTCCACT ACGGGATCCT GTTCGTGCTG
GTCGGGCACT TGATGGGGTT GTTCGTGCCG TCGGCGTGGA CCGACGCCCT CGGCCTCACC
GAGCACGGCT ACAACCTGCT GTCGCTGTTC GCCGGCACCG CCGCCGGGGC GCTGGCCGTC
ATCGGCATCC TGATGCTGAT CTACCGCCGC CGCACCACCC CGGCGGTGTT CCGCGCGACG
ACGCGCAACG ACAAGCTGAT GTACGTGGTC CTGCTGGCCG CGATCATCAT GGGCCTGGTC
GCCAAACTCA CCCACGCCGG CCTCCACGAG GGCTACGACT ATCGCGCCAC CATCGCCCCC
TGGGCCCGCA GCCTGTCCTG GCTCCAGCCC AAGACCGCAC TGATGGCCCA GGCACCGGTG
GTGTTCCAGA TCCACGCGGT CATCGGCCTC CTGCTGTTCG CCCTCCTCCC CTTCACGCGC
CTGGTCCACA TGTTCAGCGC CCCGATCCAG TATCTCTTCC GCCCGTACAT CGTCTACCGC
AGCCGCGACT CCCGCGCCCT CGGCGAGGCT CCGGTACGGC GCGGGTGGGA GGGGATCGGG
AGCTGA
 
Protein sequence
MQTFLWGALP YIAIAILITG LVWRYRYDKF GWTTRSSGSY ERRILNIASP MFHYGILFVL 
VGHLMGLFVP SAWTDALGLT EHGYNLLSLF AGTAAGALAV IGILMLIYRR RTTPAVFRAT
TRNDKLMYVV LLAAIIMGLV AKLTHAGLHE GYDYRATIAP WARSLSWLQP KTALMAQAPV
VFQIHAVIGL LLFALLPFTR LVHMFSAPIQ YLFRPYIVYR SRDSRALGEA PVRRGWEGIG
S