Gene Caci_4470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4470 
Symbol 
ID8335824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5092827 
End bp5093498 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID644957572 
Productmethyltransferase small 
Protein accessionYP_003115174 
Protein GI256393610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.820054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG ACGCCACCCT GAGCGACTGC CACGGCGGCT TCGAGGACCG CTCCGGGCAG 
TTCGACCTGC TCGGCCGCTC CTGGACGCTG CTGCCCGGCG TGTTCGCCCC GGTCCACACC
ACCTCCACCG CGCTGTTCTC CAGCTGGCTG CCGTTCCCGC CCGGCGGGGC GTTCCTGGAG
ATCGGCTCCG GCGCCGGGGT CACCGCGGTG ACCGCCGCGC TCGCCGGCTG CGCGCACGTC
ACCGCCGTGG ACATCTCCCC GGCGGCGGTG GCGAACACCG CGGCGAACGC CCGGCGGCAC
GGCGTGGCCG ACCGTGTGCG GGTCCTGAAC AGCGACCTGT TCGAGGCGCT GGACACCGGC
GAGCGCTACG ACGCGATCTA CTGGAATTCC AACGTGATCG ACGCCCCTCC GGAGTTCGAG
TACCTGGAGG AGCTGCGCTG GGCGTTCTTC GACCGCGGCT ACGCCACCCA CCACAGGTTT
CTGACTCAGG GCCCTGATCT GCTCCGTCCC GGCGGCCGCA TGTTCCTGGG CTTCAACACG
CTGGGCAACA AGGAACGGCT GCGCGTCATG GCCGACGAGC TCGGGCTGGA GCTGGCCACG
TTCCGCCGCC GGCCCGGCGT GCTCGGCGGG ATCCGGGTCG AGCTGAGCCT GCTGGAGGTG
CTGGTCGCCT GA
 
Protein sequence
MTADATLSDC HGGFEDRSGQ FDLLGRSWTL LPGVFAPVHT TSTALFSSWL PFPPGGAFLE 
IGSGAGVTAV TAALAGCAHV TAVDISPAAV ANTAANARRH GVADRVRVLN SDLFEALDTG
ERYDAIYWNS NVIDAPPEFE YLEELRWAFF DRGYATHHRF LTQGPDLLRP GGRMFLGFNT
LGNKERLRVM ADELGLELAT FRRRPGVLGG IRVELSLLEV LVA