| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4463 |
|---|
| Symbol | |
|---|
| ID | 8335817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5083435 |
|---|
| End bp | 5085897 |
|---|
| Gene Length | 2463 bp |
|---|
| Protein Length | 820 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957565 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003115167 |
|---|
| Protein GI | 256393603 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.846265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGC TGGAAGCGGG GGATCCGACA CGCATCGGCC CATATGCCAT TCTCGGCGTG
CTCGGCAGCG GCGGCATGGG CAAGGTCTAC CTCGGCCGCT CCACCGGCGG CCGGACGGTG
GCGGTCAAGG CGGTGCGGCC CGAACTGGCC GACGACTCGC AGTTCCGCCA GCGGTTCCGC
AACGAGATCG AGGCCGCCAA GTCCGTCTCC GGTGCCTTCA CCGCTGCGGT CGTGGACTCC
GACACCGAAG CGTCCGTGCC CTGGTTCGCC ACCGCGTTCA TCGCCGGCAT CTCCTTGGGG
GACGCCGTCA GCCGCTTCGG GGCGCTGCCC GAGCCCGCTT TGCGCACCCT GACCGCCGGC
CTGGCCGAGG CGATCACCGC GGTGCACCGC GCCGGGATCA TCCACCGGGA CCTCAAGCCC
GCGAACGTGC TGCTGGCCCT GGACGGCCCG TACGTCATCG ACTTCGGCAT CACCCGCGCC
ACCGAGGGCA CCGCGCTGAC CACCGCCGGG ACCGTGATGG GCTCGCCGGG CTTCATGTCG
CCGGAGCAGG CCTCGGGGGT GCGCGTGGGT CCGGAGACCG ACATGTTCTC CCTGGGCGCC
ACCCTGGTGT ACGCCGCGAC CGCGCGCAGC CCGTTCGGGG ACGGGCCGAC GCCGGCGCTG
CTGTACCGCG TGGTGAGCCA GGAGCCGGAC ATCACCGGGG TGCCGGACTC GCTGCGCGAC
ATGATCGCCG CCTGTCTGCA CAAGGAGCCG GCGCGCCGGC CCACCACCCA GCAGATTCTG
GAGTACCTGG ACGCCAACGC CCCGGCGCCG ACCACCGGCG GCTGGCTGCC CCCGCACTAC
ACCGACGCGA TCGTGCAGGC GAGCAGCGTC ATGACCCACA TGGGCATCAA CTCCGGTCCG
TCCGCGCACG TGGGCAACAC CGGAAACGAA TACAACCAGC AGTCCGGCTA CCAGGGCGGC
GGCGGCACTC CCCCGTACGG CAACAGCAAC ACCCCGGCCT ACGCCCAGAC CGCGCAGAGC
GGCATGGTCG GCGTGGGTCC CTACGGTGGT CCCGGCCCGA ACAGCGGTCC GCAGCAGCAG
ATGCAGTACC AGCAGCAGAA CCCGAACAGC GCCGGCAAGA TGAGCCGCCG CGCCCTGTTC
GGGATCATCG GCGGCGGCGT GGTCGTCCTC GGCGGCGGCG GCGCGGCGAT AGCCCTGTCC
GGCGGTTCCA GCGACAAGCA GGCCACCACC ACCGGCGGCG CGACCGGAGG CACGACCGGC
GGACCCACCA GCAGCGGCCC GTCCACCTCG GCGGACACCA GCAGCGCCCC GTCCACCACC
GGCGGGACCA CCCCGACCAG CAACCCCTCG GTGCAGGACC CGAACACTCC CGGTTCGCAG
AAGCTGGGCG GGGCGCCGCA GGGGAAACCG GCCTTCCAGC AGACCACCAC CGACCAGGTC
TACGGCAGCG CGCTGGCCAA CAACGTGCTG GTGCTCGAAG GCAGCCAGAA ACTGCACGGT
CTGAACAGCC AGGGCCAGAC CAAATGGCCG GACATCGAGT GCGGCAGCGG CACGATCGGC
ATCCTGACCG CGATGGACCC GAACGGCACC ACGCTGTACA CCACCGGTCT GGACAACACC
GGCGGCGACC CGCTGTTCGC GATCGACGTC CCGACCGGCA AGATCCTGTG GCAGGTCCCG
CAGGTCGACC GCAACTGGCA GCTGCAGGGC GCGGCCGGCG TCATCGGCAA CCTGGTGATC
GTCTCGGCCA ACGTCAACGT GCAGGGCGAC GGGCTGTACG CGGTCGACAA GACCACGCAC
AAGGTCGTGT GGAAGCAGAA CACCAACGAC ATCGGCGCCA TCCACGTGCC GCCGTCGGGC
AAGTACATCT TCACCGCCCA CGACTCGGCC ACCGCCGACA CCGACGCGAC GATCACCTGT
CTGGACGTCA CCACCGGCAA CAAGGTCTGG CAGGTCTCGC AGAAGAGCGC GGTCATGGGC
GGCGCGGGCT CGGACCCCTT CGCCTACACC AACAACCTGC TGATGACCGG CGGCGACAAG
CTCACCGCGC TGGACCCGGC CACCGGCAAG GTGGTCTGGG CGACCCAGCT CGGCAGCATC
GACACCGGCG TGAGCCTGGC GAACCACCCC TTCACCGACA ACAGCGGCCG GGTCTACGTC
ACCGCCGACG GCCTGCTGGT CGCCGCGGAC GCCAGCAACG GCAAGCTTTT GTGGCAGTCC
TCGCTGCCGG ACTCCGACCA GTTCGAGATC GACGGCGCGT TCGCCGTCGG CGACGGCCAG
CTCTACGTCA CCGACTACAA GAAGGCGCTG TACGCGGTCG ACGCCAAGAC CGGCAAGTGC
AACTGGTCCT ACTCCAACGC GCTGCTCAGC GGCCAGGACG TGTCCACGCT GACGGCCGGC
GGCGGCAAGG TGTACTACAC CGCCGGTGAG GCCATCATAG GGTTCAACGC GAACGGGCAG
TAG
|
|---|
| Protein sequence | MQPLEAGDPT RIGPYAILGV LGSGGMGKVY LGRSTGGRTV AVKAVRPELA DDSQFRQRFR
NEIEAAKSVS GAFTAAVVDS DTEASVPWFA TAFIAGISLG DAVSRFGALP EPALRTLTAG
LAEAITAVHR AGIIHRDLKP ANVLLALDGP YVIDFGITRA TEGTALTTAG TVMGSPGFMS
PEQASGVRVG PETDMFSLGA TLVYAATARS PFGDGPTPAL LYRVVSQEPD ITGVPDSLRD
MIAACLHKEP ARRPTTQQIL EYLDANAPAP TTGGWLPPHY TDAIVQASSV MTHMGINSGP
SAHVGNTGNE YNQQSGYQGG GGTPPYGNSN TPAYAQTAQS GMVGVGPYGG PGPNSGPQQQ
MQYQQQNPNS AGKMSRRALF GIIGGGVVVL GGGGAAIALS GGSSDKQATT TGGATGGTTG
GPTSSGPSTS ADTSSAPSTT GGTTPTSNPS VQDPNTPGSQ KLGGAPQGKP AFQQTTTDQV
YGSALANNVL VLEGSQKLHG LNSQGQTKWP DIECGSGTIG ILTAMDPNGT TLYTTGLDNT
GGDPLFAIDV PTGKILWQVP QVDRNWQLQG AAGVIGNLVI VSANVNVQGD GLYAVDKTTH
KVVWKQNTND IGAIHVPPSG KYIFTAHDSA TADTDATITC LDVTTGNKVW QVSQKSAVMG
GAGSDPFAYT NNLLMTGGDK LTALDPATGK VVWATQLGSI DTGVSLANHP FTDNSGRVYV
TADGLLVAAD ASNGKLLWQS SLPDSDQFEI DGAFAVGDGQ LYVTDYKKAL YAVDAKTGKC
NWSYSNALLS GQDVSTLTAG GGKVYYTAGE AIIGFNANGQ
|
|---|
| |