| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4456 |
|---|
| Symbol | |
|---|
| ID | 8335810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5071317 |
|---|
| End bp | 5072549 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644957558 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003115160 |
|---|
| Protein GI | 256393596 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC GTGCCCGGTT CGCCCGGAGC CTGCGCTCGA CCTGGTACCT GGTCGCCGGG
CTGCGCACGG CGCTGCCCGC GCTGCTCGGC GTCTGCCTGC TGCCGCTGGC GCTGCTGCTG
GCGTTCGGCG TGCCGGGGCT GCCGTGGGTC GCCGGGCGGA TCCGGGCCCT GACCAACGTC
GAGCGGCGCC GCGCGGCGAA GGTCCTGGGG CAGCCGATCC TGGAGCCGGC GACGCCGCAG
GCGATCAATC CGTATCAGCA GTATTTCTCG CTGATGCGCT CCACGGCGGT GTGGCGGGAC
ATCGGCTGGA TGTTCGTGCA CGGCTTCGTC GGGCTGATCG TCACCGTGTT CTCGGTGGAG
ATGTGGCTGA CGATCCCGTG GAACCTGGCG CTGCCGTTCT GGTGGTGGAC ACAGCCGCCG
GGCACGCTCG GCGCCATCTT GCAGATCTAC ACCTGGCCGC AGGCGATCGC CTACCCGGTG
GGGTCGGCGG CGTTGTTCAT CGTGATCCAG CTGTTCTTGC AGCCGTGGCT GGCCCGCTTC
GAGGGCTGGT ACGCCCAGCG CCTGCTCGGC CCGACCCGCC GGACCGAGCT CGCCGCCCGC
GTGGAGTCGC TGACCGAGAC CCGCGCCGAG GCCCTGGAGG CGCACGGCGC AGAGCTGCGC
CGCATCGAGC GCGACCTGCA CGACGGCACC CAGGCCCAGC TGGTCAGCGC CGCGCTCCGG
CTGGGCCTGG CCGACCAGCG GTTCGACGCC GACCCCGGCG GTGCCAGGAA GCTGATGCTG
GACGCGCGCA CCGGCATCGA GGACGCGCTG GCCGAGCTGC GCGACGTGAT CCGCGGCATC
CATCCGCCGA TCCTGAGCGA CCGCGGGCTG GCCGGGGCGG TGCGCGCGCT GGCCGCCGGA
CGCCCGGTCC CGGTGTCGGT GGAGATCCCG GAGCCGGACC GGCGCTGCCC GGCGGCGGTG
GAGGCGGCGG CGTACTTCGT GGTCGCCGAG GCGCTGACCA ACGTCGCCAA GCACAGCGGC
GCGGCGCACG CCTGGGTCTC GGTCCGGCAT GATGGCCCGT ATCTGACGGT GCGCGTCCGC
GACGACGGCC GCGGCGGCGC GGACCCCGCA GGGGGCAGCG GCCTGGCCGG CATCCGCCGC
CGGGTCGCGG CGCTGGACGG CGTCACCCGT ATCGACAGCC GCACCGACGG GACCGGCACG
ACCGTGGAAG TGGAGCTGCC GTGCGGCTTG TGA
|
|---|
| Protein sequence | MKIRARFARS LRSTWYLVAG LRTALPALLG VCLLPLALLL AFGVPGLPWV AGRIRALTNV
ERRRAAKVLG QPILEPATPQ AINPYQQYFS LMRSTAVWRD IGWMFVHGFV GLIVTVFSVE
MWLTIPWNLA LPFWWWTQPP GTLGAILQIY TWPQAIAYPV GSAALFIVIQ LFLQPWLARF
EGWYAQRLLG PTRRTELAAR VESLTETRAE ALEAHGAELR RIERDLHDGT QAQLVSAALR
LGLADQRFDA DPGGARKLML DARTGIEDAL AELRDVIRGI HPPILSDRGL AGAVRALAAG
RPVPVSVEIP EPDRRCPAAV EAAAYFVVAE ALTNVAKHSG AAHAWVSVRH DGPYLTVRVR
DDGRGGADPA GGSGLAGIRR RVAALDGVTR IDSRTDGTGT TVEVELPCGL
|
|---|
| |