Gene Caci_4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4451 
Symbol 
ID8335805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5066374 
End bp5067129 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID644957553 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003115155 
Protein GI256393591 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.623971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TGATAATCGG AGGCTCGGGC TACGTCGGCA CATTGATGCT TCCCGGGCTG 
GCCACGGAGC ATGAGATCCG TGTTCTGGAC CTGGTTCCGC CGCAGGGGGA TCACGAGCAT
GTCGCTGGCA GCGCGACGGA TCCGGCGGCG CTGGCGGCCG CGCTGGAGGG CATGGACGCG
GTCGTGCACG GCGCGATGGG GCGGCGCTCC GAGAGCCACT GGCCGCACCC GGATGTCGCG
AGCGCCTTCG AGGTGAACGT CGCCTCGGTG TACGCGACGC TGGAGGCGGC GCACGCTGCG
GGCGTGAGGC GTGCGGTGCT GATCGGGAGC CTGTCGGTGT TCGACGAGGG GCAGCTGATC
GAGCGTCAGG TCGATGAGGA GACGGCGCCG GACGCCGCGG ACGTCTACGG CGTGACGAAG
CGGCTGGCCG AGCAGGTGGG GCGGATCGCC GCCGAGGCGC ACGGGATGAC GGTCACCGTG
CTGCGGCTGG CTTTCCCGAC GCCGGACGAT GTCTGGCCGC GCTGGGCGCT GCCGGTCGTC
GACGAGCCGA TCGAGATTCG GCGTGCCGAT GGAAGCTTGG TTCCGGCGCT GGCTGGTTCG
GACTTGTCGG CTGCGGTGTC CGCGGCTTTG AGCCGCGATG ACGGCGGTTA CGACGTGTTC
CACATCGTCG GCGCGGACGA CTCGGGGCGC GGTTGGAGCA CGGCGAAGGC GCGCGACGCG
CTGGGGTGGG TCGCGCGGCG GCGGTATCAG GGGTAG
 
Protein sequence
MRILIIGGSG YVGTLMLPGL ATEHEIRVLD LVPPQGDHEH VAGSATDPAA LAAALEGMDA 
VVHGAMGRRS ESHWPHPDVA SAFEVNVASV YATLEAAHAA GVRRAVLIGS LSVFDEGQLI
ERQVDEETAP DAADVYGVTK RLAEQVGRIA AEAHGMTVTV LRLAFPTPDD VWPRWALPVV
DEPIEIRRAD GSLVPALAGS DLSAAVSAAL SRDDGGYDVF HIVGADDSGR GWSTAKARDA
LGWVARRRYQ G