Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4448 |
Symbol | |
ID | 8335802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5064537 |
End bp | 5065235 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644957550 |
Product | hypothetical protein |
Protein accession | YP_003115152 |
Protein GI | 256393588 |
COG category | [S] Function unknown |
COG ID | [COG3826] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.70211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCC TGACCGACGC CGACTGGCCC ACGATCGCCG CCGAGCTCGA CTCCTCCGGC TGCGCCCCGA CGCCGCGGCT GCTCACCCCC GAGCAGTGCG GCGGCATCGC AGCCCTCTAC GACCGCCCCG AGCTGTTCCG CACCACCGTG GACATGGCAC GCCACCGCTT CGGCTCCGGC CAGTACCGCT ACTTCACCCA CGACCTGCCC GCCCCGATCG CCGCGCTGCG CCGCGCACTG TGGCCGCACC TGCTACCGAT CGCCCGCGAC TGGGCCGAGC GCCTGGGACG CCCGGCGCCC TGGCCGGACG ACCTGGACGA ATGGCTGGAG CGGTGCCACG CCGCCGGCCA GGCACGCTCG GCACAGATCC TGCTGCGCTA CGGTCCCGGC GACTGGAACG CACTGCACCG CGACGTGTTC GGCGACATGC TCTTCCCGCT CCAGGCGGTC ATCGGGCTCG ACGCCTACGG CACGGACTAC ACCGGCGGGG AGTTCCTCCT CGTCGAGCAG CGCCCGCGCG CCCAATCCCG CGGCACCGCC ACGCCGCTCC CCCAAGGCCA CGCGCTGATC TTCACCACGC GCGACCGCCC GGTCCGCTCC TCGCGCGGCT GGTCCATCGG ACCGGTGCGG CACGGTGTCA GCACCGTGCG CTCCGGACAG CGCCGCGCGC TCGGCTTGGT GTTCCACGAC GCGGCATGA
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Protein sequence | MPALTDADWP TIAAELDSSG CAPTPRLLTP EQCGGIAALY DRPELFRTTV DMARHRFGSG QYRYFTHDLP APIAALRRAL WPHLLPIARD WAERLGRPAP WPDDLDEWLE RCHAAGQARS AQILLRYGPG DWNALHRDVF GDMLFPLQAV IGLDAYGTDY TGGEFLLVEQ RPRAQSRGTA TPLPQGHALI FTTRDRPVRS SRGWSIGPVR HGVSTVRSGQ RRALGLVFHD AA
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