Gene Caci_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4448 
Symbol 
ID8335802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5064537 
End bp5065235 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content74% 
IMG OID644957550 
Producthypothetical protein 
Protein accessionYP_003115152 
Protein GI256393588 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.70211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC TGACCGACGC CGACTGGCCC ACGATCGCCG CCGAGCTCGA CTCCTCCGGC 
TGCGCCCCGA CGCCGCGGCT GCTCACCCCC GAGCAGTGCG GCGGCATCGC AGCCCTCTAC
GACCGCCCCG AGCTGTTCCG CACCACCGTG GACATGGCAC GCCACCGCTT CGGCTCCGGC
CAGTACCGCT ACTTCACCCA CGACCTGCCC GCCCCGATCG CCGCGCTGCG CCGCGCACTG
TGGCCGCACC TGCTACCGAT CGCCCGCGAC TGGGCCGAGC GCCTGGGACG CCCGGCGCCC
TGGCCGGACG ACCTGGACGA ATGGCTGGAG CGGTGCCACG CCGCCGGCCA GGCACGCTCG
GCACAGATCC TGCTGCGCTA CGGTCCCGGC GACTGGAACG CACTGCACCG CGACGTGTTC
GGCGACATGC TCTTCCCGCT CCAGGCGGTC ATCGGGCTCG ACGCCTACGG CACGGACTAC
ACCGGCGGGG AGTTCCTCCT CGTCGAGCAG CGCCCGCGCG CCCAATCCCG CGGCACCGCC
ACGCCGCTCC CCCAAGGCCA CGCGCTGATC TTCACCACGC GCGACCGCCC GGTCCGCTCC
TCGCGCGGCT GGTCCATCGG ACCGGTGCGG CACGGTGTCA GCACCGTGCG CTCCGGACAG
CGCCGCGCGC TCGGCTTGGT GTTCCACGAC GCGGCATGA
 
Protein sequence
MPALTDADWP TIAAELDSSG CAPTPRLLTP EQCGGIAALY DRPELFRTTV DMARHRFGSG 
QYRYFTHDLP APIAALRRAL WPHLLPIARD WAERLGRPAP WPDDLDEWLE RCHAAGQARS
AQILLRYGPG DWNALHRDVF GDMLFPLQAV IGLDAYGTDY TGGEFLLVEQ RPRAQSRGTA
TPLPQGHALI FTTRDRPVRS SRGWSIGPVR HGVSTVRSGQ RRALGLVFHD AA