| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4439 |
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| Symbol | |
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| ID | 8335793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5047034 |
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| End bp | 5049217 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957542 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_003115144 |
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| Protein GI | 256393580 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA CCGCCCCACG CCGGAGCCTG TTCGGAGCCG TCGCCGCGGC CGTCATGGTG
TTCGGCGCCG TGACCGCTGC CGCGCCCGCG GTCTCGGCCA GCACCACGGC AGCTACTCCC
GCGATCAACA CCCACCCCTC CTACAACGGC CTGTCGCTGA CCCCGCCGAT GGGTTTCAAC
GACTGGGCCG GCTTTGAATG CAACAGCGAC ATGAACGAGG CGCTGTTCAC CAAGACCGCC
GACGAAATAG TCAAGCTGGG CCTGAACAAA CTCGGCTATG ACTACGTCAA CATCGACGAC
TGCTGGATGC AGAAGACCCG CGACGCAAAC GGCGACTTGC AGGTCGACGC CACCCGCTTC
CCGCACGGTC TGAAATGGCT CGGCGACTAC ATCCACAGCA AGGGCTTGAA GTTCGGCATC
TACGAGGACG CCGGCTACTA CACCTGCCAG GGCGCCGCAG GCAGCTACGG GCACTTCCAG
CAGGACGCGG ACCTCTACGC CTCCTGGGGC GTGGACTACC TCAAGCTCGA CTACTGCTAC
GAGCCGATGG ACCAGTTCCC CGGCAAGACC GAGAGCCAGG TCGCGCAGAT CGTCTACACC
GAGGCCAGCC AGGCGCTGCT GAACACGCAC CGCCCGATGC TGTTCTCCGA GTCCGCCCCG
GCCTACGTCT GCTGCTCCGG CTCGGACTTC ACCGACGAGC TCACCTGGCT CTACCAGCAC
GGCAACCTGT GGCGCTTCGG CTCGGACATC TACGACGCCT GGCCGAGCGT GCTGGAGAAC
TACAGCGAGG ACAACACCCC GGGCTTGGCG CAGTGGGCCG GTCCCGGGCA CTGGAACGAC
GCGGACATGC TGGAGATCGG CAACGGCGGG CTGACCCCCA CCGAGGAGCA GACCCAGATG
ACGCTGTGGG CCGAGATGGC CTCGCCGATC CTGCTGTCCA CCGACCTGTC GAAGCTGACC
CCGGCCGAGG TGGGGATCGT TTCGAACCCC GATGTCGTGG CCGTGGACCA GGACCGGCTC
GGCGCGCAGG GGACGATCGT GCAGTCCGGG ACCGGCTACG ACGTGCTGGC CAAGCCGCTC
GCGGACGGCG ATGTGTCGGT CGTGCTGTTC AACAAGGGCG ACACGGCGCA GACGGTCACC
ACGACCGCGG CGAAGATCGG CCTGCCGAGC CGCGGCGCGC CGTTCCAGCT GACCGATTTG
GTGAGCAAGG CCACGAGCGC CAGCGACGGC ACCATTTCGG CGTCCCTCGC ACCGCACTCG
ACGGTGATCT ACCGCGTGCA CCCCGGAGGC GACAAGCACC TGCCGATCCA CACCGCCGCG
ACGATCAGCA GCGCACCGCT CGCCGCCGGG GTACCCACGA AGGTCAGCGT TTCCTTCGCC
AATCACGGGT ATTTCGACGC GCAGCAGCCC TCTGTCACGC TGAAGCTGCC GACCGGTTGG
ACGGCGACGC CGGCTTCGGT GTCGTTGAAG AACGTCAAGC CGGGGACGTC GGCGACGGCG
ACGTTCGTCG TCACCGCCAG CGCTCCACCG CCGGGCAAGG TGACGACGAC GTTGACCACG
TCCGTCGCCT ACCGCGATCG CGGCAGACCG GCGTCCGACA GCGCGGACCT GTCCAACGTC
ACCAACACGC CGTTCCCGAC GCTGGCCGGC GCGTTCAACA ACACCGCGAT CACCGATGAG
ACCAACACCG CGCCCGGCAA CTTCGACGGG GACGGCGACA GTTACTCGGC GCAGTCGCTC
GCCACAGCCG GCGCCACGCC GGGGGCGACG ATCAGCGCCG GCGGCACGAC GTTCACCTGG
CCGTCGGCAG CGGCCGGGAC GAACGACAAC GTGGCGGGCA GCGGGGTGAT GGTGAACCTC
GCCGGGCAGG GCTCCAAGCT CGGATTCCTC GGCTCGGAGG CGGGTTTCAG CACCGACACC
GTCACGGTGG CGTACACCGA CGGCACGTCC AGCACGGGCA GTCTCGGCTT CCCGAACTGG
TGCTGCTCGT CGCCGACCGG CTACGGCGCC ACGCCGGCGA TCGTCACCGA TCACCGGAAC
ACGCCGAGCG GACCGGCGAA CTTCGGGACC GCTTACGACG TGTTCTACAA CTCGATCGCC
ATTGATGCGA CGAAGACGGT GAAGACCGTT ACTGTTCCGA GCGACCCGGC TATTCATGTC
TTCGCGATGA CGGTTCAGCC CTGA
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| Protein sequence | MSRTAPRRSL FGAVAAAVMV FGAVTAAAPA VSASTTAATP AINTHPSYNG LSLTPPMGFN
DWAGFECNSD MNEALFTKTA DEIVKLGLNK LGYDYVNIDD CWMQKTRDAN GDLQVDATRF
PHGLKWLGDY IHSKGLKFGI YEDAGYYTCQ GAAGSYGHFQ QDADLYASWG VDYLKLDYCY
EPMDQFPGKT ESQVAQIVYT EASQALLNTH RPMLFSESAP AYVCCSGSDF TDELTWLYQH
GNLWRFGSDI YDAWPSVLEN YSEDNTPGLA QWAGPGHWND ADMLEIGNGG LTPTEEQTQM
TLWAEMASPI LLSTDLSKLT PAEVGIVSNP DVVAVDQDRL GAQGTIVQSG TGYDVLAKPL
ADGDVSVVLF NKGDTAQTVT TTAAKIGLPS RGAPFQLTDL VSKATSASDG TISASLAPHS
TVIYRVHPGG DKHLPIHTAA TISSAPLAAG VPTKVSVSFA NHGYFDAQQP SVTLKLPTGW
TATPASVSLK NVKPGTSATA TFVVTASAPP PGKVTTTLTT SVAYRDRGRP ASDSADLSNV
TNTPFPTLAG AFNNTAITDE TNTAPGNFDG DGDSYSAQSL ATAGATPGAT ISAGGTTFTW
PSAAAGTNDN VAGSGVMVNL AGQGSKLGFL GSEAGFSTDT VTVAYTDGTS STGSLGFPNW
CCSSPTGYGA TPAIVTDHRN TPSGPANFGT AYDVFYNSIA IDATKTVKTV TVPSDPAIHV
FAMTVQP
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