Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4439 |
Symbol | |
ID | 8335793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5047034 |
End bp | 5049217 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644957542 |
Product | Alpha-galactosidase |
Protein accession | YP_003115144 |
Protein GI | 256393580 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCA CCGCCCCACG CCGGAGCCTG TTCGGAGCCG TCGCCGCGGC CGTCATGGTG TTCGGCGCCG TGACCGCTGC CGCGCCCGCG GTCTCGGCCA GCACCACGGC AGCTACTCCC GCGATCAACA CCCACCCCTC CTACAACGGC CTGTCGCTGA CCCCGCCGAT GGGTTTCAAC GACTGGGCCG GCTTTGAATG CAACAGCGAC ATGAACGAGG CGCTGTTCAC CAAGACCGCC GACGAAATAG TCAAGCTGGG CCTGAACAAA CTCGGCTATG ACTACGTCAA CATCGACGAC TGCTGGATGC AGAAGACCCG CGACGCAAAC GGCGACTTGC AGGTCGACGC CACCCGCTTC CCGCACGGTC TGAAATGGCT CGGCGACTAC ATCCACAGCA AGGGCTTGAA GTTCGGCATC TACGAGGACG CCGGCTACTA CACCTGCCAG GGCGCCGCAG GCAGCTACGG GCACTTCCAG CAGGACGCGG ACCTCTACGC CTCCTGGGGC GTGGACTACC TCAAGCTCGA CTACTGCTAC GAGCCGATGG ACCAGTTCCC CGGCAAGACC GAGAGCCAGG TCGCGCAGAT CGTCTACACC GAGGCCAGCC AGGCGCTGCT GAACACGCAC CGCCCGATGC TGTTCTCCGA GTCCGCCCCG GCCTACGTCT GCTGCTCCGG CTCGGACTTC ACCGACGAGC TCACCTGGCT CTACCAGCAC GGCAACCTGT GGCGCTTCGG CTCGGACATC TACGACGCCT GGCCGAGCGT GCTGGAGAAC TACAGCGAGG ACAACACCCC GGGCTTGGCG CAGTGGGCCG GTCCCGGGCA CTGGAACGAC GCGGACATGC TGGAGATCGG CAACGGCGGG CTGACCCCCA CCGAGGAGCA GACCCAGATG ACGCTGTGGG CCGAGATGGC CTCGCCGATC CTGCTGTCCA CCGACCTGTC GAAGCTGACC CCGGCCGAGG TGGGGATCGT TTCGAACCCC GATGTCGTGG CCGTGGACCA GGACCGGCTC GGCGCGCAGG GGACGATCGT GCAGTCCGGG ACCGGCTACG ACGTGCTGGC CAAGCCGCTC GCGGACGGCG ATGTGTCGGT CGTGCTGTTC AACAAGGGCG ACACGGCGCA GACGGTCACC ACGACCGCGG CGAAGATCGG CCTGCCGAGC CGCGGCGCGC CGTTCCAGCT GACCGATTTG GTGAGCAAGG CCACGAGCGC CAGCGACGGC ACCATTTCGG CGTCCCTCGC ACCGCACTCG ACGGTGATCT ACCGCGTGCA CCCCGGAGGC GACAAGCACC TGCCGATCCA CACCGCCGCG ACGATCAGCA GCGCACCGCT CGCCGCCGGG GTACCCACGA AGGTCAGCGT TTCCTTCGCC AATCACGGGT ATTTCGACGC GCAGCAGCCC TCTGTCACGC TGAAGCTGCC GACCGGTTGG ACGGCGACGC CGGCTTCGGT GTCGTTGAAG AACGTCAAGC CGGGGACGTC GGCGACGGCG ACGTTCGTCG TCACCGCCAG CGCTCCACCG CCGGGCAAGG TGACGACGAC GTTGACCACG TCCGTCGCCT ACCGCGATCG CGGCAGACCG GCGTCCGACA GCGCGGACCT GTCCAACGTC ACCAACACGC CGTTCCCGAC GCTGGCCGGC GCGTTCAACA ACACCGCGAT CACCGATGAG ACCAACACCG CGCCCGGCAA CTTCGACGGG GACGGCGACA GTTACTCGGC GCAGTCGCTC GCCACAGCCG GCGCCACGCC GGGGGCGACG ATCAGCGCCG GCGGCACGAC GTTCACCTGG CCGTCGGCAG CGGCCGGGAC GAACGACAAC GTGGCGGGCA GCGGGGTGAT GGTGAACCTC GCCGGGCAGG GCTCCAAGCT CGGATTCCTC GGCTCGGAGG CGGGTTTCAG CACCGACACC GTCACGGTGG CGTACACCGA CGGCACGTCC AGCACGGGCA GTCTCGGCTT CCCGAACTGG TGCTGCTCGT CGCCGACCGG CTACGGCGCC ACGCCGGCGA TCGTCACCGA TCACCGGAAC ACGCCGAGCG GACCGGCGAA CTTCGGGACC GCTTACGACG TGTTCTACAA CTCGATCGCC ATTGATGCGA CGAAGACGGT GAAGACCGTT ACTGTTCCGA GCGACCCGGC TATTCATGTC TTCGCGATGA CGGTTCAGCC CTGA
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Protein sequence | MSRTAPRRSL FGAVAAAVMV FGAVTAAAPA VSASTTAATP AINTHPSYNG LSLTPPMGFN DWAGFECNSD MNEALFTKTA DEIVKLGLNK LGYDYVNIDD CWMQKTRDAN GDLQVDATRF PHGLKWLGDY IHSKGLKFGI YEDAGYYTCQ GAAGSYGHFQ QDADLYASWG VDYLKLDYCY EPMDQFPGKT ESQVAQIVYT EASQALLNTH RPMLFSESAP AYVCCSGSDF TDELTWLYQH GNLWRFGSDI YDAWPSVLEN YSEDNTPGLA QWAGPGHWND ADMLEIGNGG LTPTEEQTQM TLWAEMASPI LLSTDLSKLT PAEVGIVSNP DVVAVDQDRL GAQGTIVQSG TGYDVLAKPL ADGDVSVVLF NKGDTAQTVT TTAAKIGLPS RGAPFQLTDL VSKATSASDG TISASLAPHS TVIYRVHPGG DKHLPIHTAA TISSAPLAAG VPTKVSVSFA NHGYFDAQQP SVTLKLPTGW TATPASVSLK NVKPGTSATA TFVVTASAPP PGKVTTTLTT SVAYRDRGRP ASDSADLSNV TNTPFPTLAG AFNNTAITDE TNTAPGNFDG DGDSYSAQSL ATAGATPGAT ISAGGTTFTW PSAAAGTNDN VAGSGVMVNL AGQGSKLGFL GSEAGFSTDT VTVAYTDGTS STGSLGFPNW CCSSPTGYGA TPAIVTDHRN TPSGPANFGT AYDVFYNSIA IDATKTVKTV TVPSDPAIHV FAMTVQP
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