| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4427 |
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| Symbol | |
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| ID | 8335781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5029492 |
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| End bp | 5033016 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957530 |
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| Product | Ig domain protein group 2 domain protein |
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| Protein accession | YP_003115132 |
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| Protein GI | 256393568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.407706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.105272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCGA GGCGAGTTGG TGTGCGGCGG TTGGGATGGG GGCGGGGTGC TGTCGCGCTG
GTTGTCGCTG TGGCGGGTTG TGTCGCGGTG GTGGCGCCCG CGCATTCGGT GCCTGGTGCC
GTCGGGGCTG GTGGAGGTGG TGGTGCGGCT TCGGGTGCTT GGCTGCCGAC GACGCCGGAT
CAGTGGCCGC TGGTTGTCGA CGAGGCCGTG TCGCCGAGTG TGACGCTTAC TCATGGTGTG
CAGCAGCATT CTGATGTGCT GCGGACGGTC GGGGGTGCGC AGCGGGCGCA GGTGATGGAT
GTCGACCTCG CTGATCCCAA TGTGCGGTTG GGTGTTGTGG AGTCTCACGA TCATCTCACC
GATGCTGCTG ATGAGGTCCC GTCTTCCATG GCGCACCGGA CTGGGGCGGT GGGCGGGGTG
AACGGGGACT TCTTCGAGAT CTATGGCAGC GGGCGGCCGC TGGGCATGGT CGTCATCGAC
GGTCGGCTGG TGAAGAGTCC TGATCCGACG TGGAACGCCG ACCTGTGGGT GCGCCATGAC
GGCAGCATCG GCATCGGCAC CGAGACCTAC GCCGGCAGCC TCACCGATGG CGCCGCCACC
GCTGCGATTA CCGCCGTCAA CGCTGTGAAC AGCCTGTCCG GCAACGCCAT CGTGCGCGTC
ACCCCCGATC TGGGCACCCC GTCGCCGATC GCGGCCTCGA CCGTCGTTGC CGGCCACCTC
GGCGCGGACG GCACCACGCT GCTCGTCGAC TCCGTCACCG CCGGCGTGAC CACCCTGCCG
CAGCTCGCCG CAGGGACCGA GGACCTCGTC GGCTCCGGGA CCCAAGCCGG GTGGCTGTCG
CAGAACATTC ATATGGGCGA CCAGATCGCT GTCAGCGAGA AGATCGGTCC CGACCCCGAC
GTCGTCCAGG GCCTGTCCGG CGGCGCGATC CTGGTCCAGA ACGGCCAGCG CGCCGTGCCG
CTCCAGGGCT CCGGCGAGAA CAACGTCGAC AACCCGGTCA CCGCGGTCGG CGTCAGCCAG
GACGGCAAGC ACGCCGTCTT CGCCGCCTTC GACGGCCATC AGAGCGAAGA CGTCGCCCAA
GGCCTGACCC GCCCCCAGAT CGCCGGCTGG ATGACGCAGC ACGGCGCGTA CAACGCGATC
CTGTTCGACA GCGGCGGCTC CACTCAGATG GTCGGCCGCC TTCCCGGACA GACTCAGGCT
TCTGTCTTGA ACGTCCCCTC CGACGGCCAC GAGCGCCCCG TCGCCAACGG CCTGTTCATC
TACAGCACCG AGAAGGCGCC CGGCACGGCG GTCAAGGCGG TCGTCAACAA CGGCAAGCCG
CTGACGGCGC TGGCCGGAAC CACCGTCCCG CTCTCCGCCT ACGGCCTGGA CGCCGCCGAC
AATCCGGCAC GCGACGCCGC CAGCCTCAAG GTCTCGCCGG GCAAGATCGC GACCGTGAAT
GGCAGCACCC TGACGTTCAC CCGCCCCGGT CACGGCGTCC TGCACGTGAC CGCCGGGCAC
GCGCAATCGA CCATCCCGCT GACCGTCGTC GACAGTCTCA AAACCCTGAC TGTCACCCCG
AACCAGGTCG ATCTCGACAG CGGCGCGACA CAGCTGATCA CGGCCGCCGC CACGGCGCCC
GACGGCAGCC CTGTCGACCT CCTCGCCGAA GCCGTGAAGT GGAGTGTCGA CCCACCCGCG
CTCGGCACGA TCGCCCCCGA CGGCACCTTC ACCGCGGCGC CCACCGGCTC CGGCATGGTC
ACCGTCACCG CGAGCGCCGG CGGACGCACC GCCACCGTCA GCATCGCCGT CGGCCGCTCG
ACCACGAACG TGGACCCCCT CACCGACGCC TCGAAGTGGT CGATCACCGA CGCCTACATG
AACGTCTACC CGCGCAAGGT CCCCAGCCCT GGCACGCACA GCACCTCCGA CGGCTCGATG
TCCTTCGACC CGGCGACCAA GGCCCAGCTC GGTGACGCAG GGTCCTTCGA CATCCACTAC
GACTACCCCT ACGTCAGCAA AACCCTCGAC CTGAGCGTGT ATCTCAACGA CCCGAACAGC
GAACAGGTCC CGCTCCTGAA CGGCACCCAG GCGCCGATCG GCCTCGGCGT GTGGGTCAAG
GGCAACCCCG ACCTCGCCTC GCGCCCGGGA GCCGGACTCG CGCCGGGCAT CGTCACCCTC
AACGTGGGCA TCTGGCAGTC CACCAGCCAG CCGACCAGCT TCTACCCGAC CGGCGTCACC
TTCGACGGCT GGCAGTACGT GGTCGCCCAA CTCCCGCCGG GCCTGCAGTA CCCGCTGCGC
ATCAACTACC TCGGCCTGGT CGTCATCAAG CCCGGCCCGA ACCTGAGCGG CGACGTCCAC
CTCGCCGACC TGCAAGCGGT CTACTCCCCG CGCCCGCCGG TCCCGCCGAC GTACACGGCG
ATCCCGAAGA ACCCGTCGTG GCTGAGCTTC ACCGACGTCG GCTCGTTCAA GCCCGGCGGC
ACGAGCATCG CAGCCTTCGA CGACGCGCAC ACCACGGCGG CGAACCCGGC CGCCACCGGA
ACCGTGGCGA TGAAGGCGAT GCCCGGACTG CTGGCGAACC TGCCGACCGC CGCGAAACCC
TCGATGGTTC AGGCACTCGG CGACATGTCC GACGACGGAC AGCTGCCGGA CCTGACCAAT
CTCAAAACCC TGCTAGACGG ACTTGGCGTG CCATACCATG ACGCGGTCGG CAACCACGAG
ATCACCCAGG GCGCGACGCC GGAAAACGCC AACTTCGCCA ACGTCTTCGG CGCCACGCAC
TACGCCTACG ACCAGGGCGC GGCGCGCGTC ATCGTCACCG ACAGCGGCCA CATCGGCATC
ACCGCCTCCG ACCCGTATCA GACGGTTGAT ACCGACGAGT CGCAATACCT GTGGCTGGCG
CAGCAACTGA CGCAGAACAC GCAGAAGGTC GCGATCGTCA CCACGCACGT CCCGGCGTAC
GACCCGCACC CCCGCGCCGA CAGCCAGTTC TCCGACCGCT TCGAAGCCGA GATGTACGAG
CGGCTCGTGC AGCGGTATCA GCAGACGCAC CCCGGCGTCC ACGTCATGAT GCTGTTCGGC
CACGCCCGAG GCTGGGCTGA GGACGTGCGG CTGCCCGACG GCACCGAATC GCCCGACGGC
ATCCCGAACT TCGTCGTCGC CGACCTCGGC GCCCCGCCGT ACGCGCCGGA AGACCAGGGC
GGCTTCTACA ACTACGGGCT CTTCAACGTC CTGCCGAACG GCACGGTGCA GTTCGCGGTG
CAACCGCTGC TGGCCTCGAT CGCGGTCACG GCGCCCGCAC CACAGCTGAC ACTCGGCGCC
AAGGAGCAGC TGAGCGCGGT GGGCACGTCG CTGACCGGGA CGGACGCCCC GGCGTTGCAG
GTACCGATCG CCGATCCGGT GTCGCGGCAC TGGACGTCGT CGGACCCGCG CATCGCCTCC
GTCGACCCGT CCAGCGGCGT GCTGACGGCC CACTGCGCGG GGACCGTGAC GGTCGCCGTG
ACCGCCGGCG GCATCACAAG CACCGCTTCC GTCACCGCGA AATAG
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| Protein sequence | MVSRRVGVRR LGWGRGAVAL VVAVAGCVAV VAPAHSVPGA VGAGGGGGAA SGAWLPTTPD
QWPLVVDEAV SPSVTLTHGV QQHSDVLRTV GGAQRAQVMD VDLADPNVRL GVVESHDHLT
DAADEVPSSM AHRTGAVGGV NGDFFEIYGS GRPLGMVVID GRLVKSPDPT WNADLWVRHD
GSIGIGTETY AGSLTDGAAT AAITAVNAVN SLSGNAIVRV TPDLGTPSPI AASTVVAGHL
GADGTTLLVD SVTAGVTTLP QLAAGTEDLV GSGTQAGWLS QNIHMGDQIA VSEKIGPDPD
VVQGLSGGAI LVQNGQRAVP LQGSGENNVD NPVTAVGVSQ DGKHAVFAAF DGHQSEDVAQ
GLTRPQIAGW MTQHGAYNAI LFDSGGSTQM VGRLPGQTQA SVLNVPSDGH ERPVANGLFI
YSTEKAPGTA VKAVVNNGKP LTALAGTTVP LSAYGLDAAD NPARDAASLK VSPGKIATVN
GSTLTFTRPG HGVLHVTAGH AQSTIPLTVV DSLKTLTVTP NQVDLDSGAT QLITAAATAP
DGSPVDLLAE AVKWSVDPPA LGTIAPDGTF TAAPTGSGMV TVTASAGGRT ATVSIAVGRS
TTNVDPLTDA SKWSITDAYM NVYPRKVPSP GTHSTSDGSM SFDPATKAQL GDAGSFDIHY
DYPYVSKTLD LSVYLNDPNS EQVPLLNGTQ APIGLGVWVK GNPDLASRPG AGLAPGIVTL
NVGIWQSTSQ PTSFYPTGVT FDGWQYVVAQ LPPGLQYPLR INYLGLVVIK PGPNLSGDVH
LADLQAVYSP RPPVPPTYTA IPKNPSWLSF TDVGSFKPGG TSIAAFDDAH TTAANPAATG
TVAMKAMPGL LANLPTAAKP SMVQALGDMS DDGQLPDLTN LKTLLDGLGV PYHDAVGNHE
ITQGATPENA NFANVFGATH YAYDQGAARV IVTDSGHIGI TASDPYQTVD TDESQYLWLA
QQLTQNTQKV AIVTTHVPAY DPHPRADSQF SDRFEAEMYE RLVQRYQQTH PGVHVMMLFG
HARGWAEDVR LPDGTESPDG IPNFVVADLG APPYAPEDQG GFYNYGLFNV LPNGTVQFAV
QPLLASIAVT APAPQLTLGA KEQLSAVGTS LTGTDAPALQ VPIADPVSRH WTSSDPRIAS
VDPSSGVLTA HCAGTVTVAV TAGGITSTAS VTAK
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