Gene Caci_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4426 
Symbol 
ID8335780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5028812 
End bp5029237 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID644957529 
Producthypothetical protein 
Protein accessionYP_003115131 
Protein GI256393567 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0430646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.316047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAG CCAGCCGTGA AATAGTCCTG AACGCCTGGA AGACCTTCGC CAGCCACGAC 
GCCGTCCAGA TCGAGCCGGT CTTCACCGAG GACGCCGAAT GGCTGGCGCC GCCCGGCAAC
GCCACCGCCC TCGCGCTGGA CTGCCCCAGC CACATGATCG GCCGCACAGC GATCGCCGGC
TTCCTTGCCA ACGACTTCGG TCGCCTGTTC GTCGCCGACG TCGAGGTCAC CTTCCGCGGC
ATCCACGCCA CCGACGACCT CGTCGTCATC GAGGAGACGA TGCGCTCGAC CCTGCCCGGC
GGCGGCCACT ACGAGAACGA CTACTGTCTC GTCTTCGAAC TCCGCGACGG CCTGATCCAC
CGGGTACGCG AATACATGGA CACCAGCCGC GCGCATCGCA TGGTGTTCGG CGCCGGTGGC
ATCTGA
 
Protein sequence
MSEASREIVL NAWKTFASHD AVQIEPVFTE DAEWLAPPGN ATALALDCPS HMIGRTAIAG 
FLANDFGRLF VADVEVTFRG IHATDDLVVI EETMRSTLPG GGHYENDYCL VFELRDGLIH
RVREYMDTSR AHRMVFGAGG I