| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4414 |
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| Symbol | |
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| ID | 8335768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5012978 |
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| End bp | 5014441 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957517 |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003115119 |
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| Protein GI | 256393555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG ACCGCACTGA CCGCACTGAC CGCACCAACC GCAGACTGGC CGCCGCGCTC
GCGGTGATCG CCAGCTGCGC GCTGGCCGGG AGCCTGGCCC TGGTCAGACC CGCCGGCGCC
GCGGACACCT CGCTGAAGCA GCTGTCCGAG GCCAAGGGCA AGTACTTCGG GACCGCGCTG
GTCCAGTCGA ACCTGTCCAA CTCCGCGCTC GTCGGCGTGG CGACCTCGCA GTTCGACATG
ATGACGCCCG GCAACGAGAT GAAGTGGGAC ACCACCGAGC CCTCGAACGG CAGCTTCAAC
TTCGGTCCCG GCGACACGCT GGTCGCCTTC GCTCAGGCGC ACTCGATGAA GGTCCGCGGC
CACAACCTGG TGTGGCACAG CCAGCTGCCG GGGTGGGTCT CGAGCCTGCC GTCCAGCCAG
GTCCAGGCCG CGATGGAGAC CCACATCACC ACCGAGGCCA CGCACTACAA GGGTGAGGTC
TATTCCTGGG ACGTCGTCAA CGAGCCCTTC AACGAAGACG GCACACTGCG CCAGGACGCG
TTCTACAACG CCATGGGCAC CAACTACATC GCCGACGCCA TCCGCACCGC GCACGCCGCC
GACCCGAACG CCAAGCTCTA CCTGAACGAC TACAACATCG AGGGCGAGAA CGCCAAGAGC
AACGCCATGT ACTCCCTGGC GCAATCGCTG CTCGCGCAGG GCGTGCCGCT GGGCGGGATC
GGGCTGGAGA GCCACTTCAT CCTGGGCCAG GTGCCCTCCA CGATGCAGGC GAACATGCAG
CGCTTCGCAG CCCTGGGCCT GGACGTGGCG GTGACAGAGC TCGACGACCG GATCCAGCTG
CCGGCCAGCA GCGCCAACCT GCAGCAGCAG GCCAGCGACT ACTCGGCGGT GATCGGGGAC
TGTCTGGCGG TCACGCGGTG CGTCGGCGTT TCGCAGTGGG GCGTGGGAGA CGCGGACTCC
TGGATCCCCG GTACGTTCTC CGGCTACGGC GCCGCGACGA TGTACGACCA GAACTACCAG
CCGAAGCCCG CGTTCAACGC CTCGATCGCG GCCCTGGGCG GCTCCTCGGG GTCGACTTCG
CCGAGCTCCT CGACGCCTAG CACTCCCCCG ACGACCTCCA GCTCCTCCCC GGGCGGCGGC
GGTAGCGCGG CGTGCAAGGT GAGCGACGTG GTGAGCGCCT GGAACACCGG GCTGACCGAG
AACATCACCA TCGCCAACAC CGGATCGGCG GCGGTCAACG GCTGGAAGCT GACGTTCACG
CTGGCGTCGG GGCAGACCGT CAGCAACAGC TGGAACGCGA CGATCAGTCC CTCCTCCGGT
CAGGTGACGG CGACGAACAT GAGCTACAAC GCGGCGATCG CACCCGGTTC CTCGGCCAGT
TTCGGATTCC AGGCCACCCA CACCGGGAAC GCGTCGGCGC CTTCTTCCTT CAGCCTCAAC
GGACAGGTGT GCACCAACGG CTGA
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| Protein sequence | MHTDRTDRTD RTNRRLAAAL AVIASCALAG SLALVRPAGA ADTSLKQLSE AKGKYFGTAL
VQSNLSNSAL VGVATSQFDM MTPGNEMKWD TTEPSNGSFN FGPGDTLVAF AQAHSMKVRG
HNLVWHSQLP GWVSSLPSSQ VQAAMETHIT TEATHYKGEV YSWDVVNEPF NEDGTLRQDA
FYNAMGTNYI ADAIRTAHAA DPNAKLYLND YNIEGENAKS NAMYSLAQSL LAQGVPLGGI
GLESHFILGQ VPSTMQANMQ RFAALGLDVA VTELDDRIQL PASSANLQQQ ASDYSAVIGD
CLAVTRCVGV SQWGVGDADS WIPGTFSGYG AATMYDQNYQ PKPAFNASIA ALGGSSGSTS
PSSSTPSTPP TTSSSSPGGG GSAACKVSDV VSAWNTGLTE NITIANTGSA AVNGWKLTFT
LASGQTVSNS WNATISPSSG QVTATNMSYN AAIAPGSSAS FGFQATHTGN ASAPSSFSLN
GQVCTNG
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