Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4410 |
Symbol | |
ID | 8335764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5005707 |
End bp | 5006996 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957513 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003115115 |
Protein GI | 256393551 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.164749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG CGAACCACTT GCTCGACCCC TCCGGAGCCC TTCCGCAGAC CCGACCCCCG TGGACCTCCC GCGACAGCCT GCGGATCACC CGCGTGCGGG CGATCGTCAC CGCCCCCGAG GGGCAGCCGC TCGTGGTGGT CCGCGTCGAC ACCTCCGACG ACGGCCTCTA CGGCCTGGGC TGCGCCACCT TCACCCAGCG CTACGCCGCC GTGGCCGCCG CCGTCGACGA GCACGTCGGA CCGCTGGCCG TCGGCCGCCA CCCGGCCGAC ATCGAGGACA TCACACGCCT GATTCACTAC TCCTCGTACT GGCGCAGCGG ACCGGTGCTC AACAACGCGC TGTCCGGTCT GGACCAAGCG CTGTGGGACA TCGCCGGCAA GCGCGCCGGC ATGCCGGTGT ACGAGCTGCT CGGCGGGCGC AGCCGATCGG CGGTCGAGGT GTATTCGCAC GCTGCCGGCG GCACCATCGA GGCGACGCTC GACCAGGCGG AGGAGCTGCT GGCCGAGGGC TACCGGAACG TGCGGCTCCA GCTCGGCGGT CCGGGCCTGG GCACGTATGG CGCGCCCGGC ACGCTCGGCG GCTACCCGCG CTCGCCACAT CCGGACGGCT GGGCCGTCGA GCAGTATCTG CGTGACGCGC CGCGGCTTTT CGCCGCTGCC CGCGAGCGCC TTGGCGACAG CGTCAACCTG ATGCACGACG TGCACAGCCG CCTCACTCCG AAGCAGGCCG TCGTGCTGGC GCGCGCCCTG GAGCCGTATC GGCTGTCGTT CCTTGAGGAC GTCATCGCCC CCGAGCTCTA CGACCGGCTG CCCGAGGTGC GCGCCGCCTC GCCGGTACCG ATCGCAGTGG GCGAACAGAT CGGCTCGGTG CCGGACGCGG TGCGGCTGGT GCGCGACGGC GGCGTGGATC TGCTGCGCCT GCACACCTCC GCGGTCGGCG GGCTCACCCC GACCCGCAAG ATCGTCGCGC TGTGCGAGCT GCTCGGCGTG CGCACCGCGT TCCACTCCCC GGCGGACGTC TCGCCGGTCG GCGTCGCGGC GAACCTGGCC GTGGACATCT CGACCCCGGC GTTCGGCTAC CAGGAGTCGC ACACCTACAA CGACGCCACG CACGAGGTTT TCCCGGGCAC GCGGGTCGTC CGCGAGGGGC ACTTGTACCC CGCGGAGGAG CCGGGGTGGG GGATCGAGAT CGACGAGCGT GCGGCGGCGA AGTTCCCGCC GGTGAAGTTC CTGCACGAGC GGTGGTCCTC GGGTGTGCGG CGCCCCGACG GCGGGCTGGA GGCTCCGTGA
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Protein sequence | MTDANHLLDP SGALPQTRPP WTSRDSLRIT RVRAIVTAPE GQPLVVVRVD TSDDGLYGLG CATFTQRYAA VAAAVDEHVG PLAVGRHPAD IEDITRLIHY SSYWRSGPVL NNALSGLDQA LWDIAGKRAG MPVYELLGGR SRSAVEVYSH AAGGTIEATL DQAEELLAEG YRNVRLQLGG PGLGTYGAPG TLGGYPRSPH PDGWAVEQYL RDAPRLFAAA RERLGDSVNL MHDVHSRLTP KQAVVLARAL EPYRLSFLED VIAPELYDRL PEVRAASPVP IAVGEQIGSV PDAVRLVRDG GVDLLRLHTS AVGGLTPTRK IVALCELLGV RTAFHSPADV SPVGVAANLA VDISTPAFGY QESHTYNDAT HEVFPGTRVV REGHLYPAEE PGWGIEIDER AAAKFPPVKF LHERWSSGVR RPDGGLEAP
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