Gene Caci_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4393 
Symbol 
ID8335747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4986865 
End bp4987404 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content73% 
IMG OID644957496 
Productphage tail protein 
Protein accessionYP_003115098 
Protein GI256393534 
COG category 
COG ID 
TIGRFAM ID[TIGR02242] phage tail protein domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGCG CGGCCGACGG GCTCGGCAGC CCGTTCCCGC TCGGCGAGCA GCTGCCGAGC 
GTCTACGCCG ACGACGATTT CGCGCAGCGT TTCGTCGGCG GTCTGGACGA CCTGTTCGCG
CCGATGTTCT CGGTGCTGGA CAACCTTTCG GCCTACCTGC GGCCCGAGCT GGCGCCGCCG
GACTTCGTGT CCTGGCTCGG CGGCTGGGTC GGCGCGGAGC TGTCCGGGGA CGAGTCCGAC
CCGGACCTGC GCGCCGCGGT GTCCGGCGCG GCCGGGCTGC ACCGCTATCG CGGGACCGTG
CACGGCCTGG CCGAAGCCGT CCGCCTCGGG TTCGGCATCG AGCCGACCAT CGTGGAGAGC
GGGGGCATGT CCTGGTCGGC GCGTCCGCTC GGGCCGTTGC CGGGGGAGCC CGAGCCGGCT
TTGCAGGTCC GGCTCACCAA GGCCCAGGCC AGCTCGGTCG ATCTGGCTCG CCTGCAGGCC
CTGGTGGCCG CGGTGCGGCC GGCGCACGTC CCGTACTCCG TTGTCGTCGA AGAATCCTGA
 
Protein sequence
MRGAADGLGS PFPLGEQLPS VYADDDFAQR FVGGLDDLFA PMFSVLDNLS AYLRPELAPP 
DFVSWLGGWV GAELSGDESD PDLRAAVSGA AGLHRYRGTV HGLAEAVRLG FGIEPTIVES
GGMSWSARPL GPLPGEPEPA LQVRLTKAQA SSVDLARLQA LVAAVRPAHV PYSVVVEES