Gene Caci_4391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4391 
Symbol 
ID8335745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4984459 
End bp4984896 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content71% 
IMG OID644957494 
ProductGPW/gp25 family protein 
Protein accessionYP_003115096 
Protein GI256393532 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.908149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.82195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGAGC GCTTCGTCGG CTCCGGCTGG GGCTTCCCGC TGCGCGTGGA CGCCGGCGGC 
CGCATCGGCC TGGTCTCCCA CGACCAGGAG ATCGAGGAGG CCATGCGCCT GGTGCTGGCC
ACCGCGCCGG GGGAGCGGCC GATGCGCCCG GAGTTCGGCT GCGCCGTGCA CGACCTGGTG
TTCGCCCCGG TCAACGAGAA GACCGTGGGC CGCATCCAGC ACGAGGTGCG CTCCAGCCTG
GACCGCTGGG AGCCGCGCAT CTCGGTCACC GGGGTCGAGG TCACCGTGGA CCCCGACCGC
CCGACCGTCC TGTACATCGA CGTGCACTAC CAGCTGCGCG GCACCAACAA CCCGCGGTCC
CTGGTGTTCC CCTTCTACGT CATCCCCGAC CACGAGGGAC CGGGAACCAC GACAGCCCCA
GATACGGAAG CAGCCTGA
 
Protein sequence
MGERFVGSGW GFPLRVDAGG RIGLVSHDQE IEEAMRLVLA TAPGERPMRP EFGCAVHDLV 
FAPVNEKTVG RIQHEVRSSL DRWEPRISVT GVEVTVDPDR PTVLYIDVHY QLRGTNNPRS
LVFPFYVIPD HEGPGTTTAP DTEAA