Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4391 |
Symbol | |
ID | 8335745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4984459 |
End bp | 4984896 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957494 |
Product | GPW/gp25 family protein |
Protein accession | YP_003115096 |
Protein GI | 256393532 |
COG category | [R] General function prediction only |
COG ID | [COG3628] Phage baseplate assembly protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.908149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.82195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGAGC GCTTCGTCGG CTCCGGCTGG GGCTTCCCGC TGCGCGTGGA CGCCGGCGGC CGCATCGGCC TGGTCTCCCA CGACCAGGAG ATCGAGGAGG CCATGCGCCT GGTGCTGGCC ACCGCGCCGG GGGAGCGGCC GATGCGCCCG GAGTTCGGCT GCGCCGTGCA CGACCTGGTG TTCGCCCCGG TCAACGAGAA GACCGTGGGC CGCATCCAGC ACGAGGTGCG CTCCAGCCTG GACCGCTGGG AGCCGCGCAT CTCGGTCACC GGGGTCGAGG TCACCGTGGA CCCCGACCGC CCGACCGTCC TGTACATCGA CGTGCACTAC CAGCTGCGCG GCACCAACAA CCCGCGGTCC CTGGTGTTCC CCTTCTACGT CATCCCCGAC CACGAGGGAC CGGGAACCAC GACAGCCCCA GATACGGAAG CAGCCTGA
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Protein sequence | MGERFVGSGW GFPLRVDAGG RIGLVSHDQE IEEAMRLVLA TAPGERPMRP EFGCAVHDLV FAPVNEKTVG RIQHEVRSSL DRWEPRISVT GVEVTVDPDR PTVLYIDVHY QLRGTNNPRS LVFPFYVIPD HEGPGTTTAP DTEAA
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