| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4382 |
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| Symbol | |
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| ID | 8335736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4972904 |
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| End bp | 4974376 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957485 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115087 |
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| Protein GI | 256393523 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.290499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.488443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGTTG ATCTGAACCC GGTGGCGGCG GACGTCGAAC CGGGCGCTGA AGCGACGGTG
ACGATCACCG TCCGCAACAC CGGCGACATC GTCGAGGAGT ACCACCTGCA GGCCGCCGGC
GATCCCGCTC GCTGGGGCGG CATCGAGCCG CAGACGCTGC GCCTCTATCC GGGCACCACC
GGTACCGCGC AGCTGACCTT CTCCCCGCCC CGCAGCTCAG AGGCACAAGC CGGGCCGCAG
TCCTATGCGG TGAAGGTGAC GCCGCGCGAA GACCGCGAGA ACACTTTCGC CATCGAAGGC
GTCCTGCGCG TCGCAGAGTT CGCCGATCTG CGCGCCGAAC TCCTGCCCTC GACGACCCGC
GGCTGGCATC GCGGCAAGGT CCGCCTCGCC GTCGACAACT ACAGCAATGT GGTGACCAGC
GCCGCGGTGT CGACCACCTC GACCAACTCC AACCTCCAGG TAGACATCCG CACCGCAGCC
CTTCGCCTGC AACCCGGACG CGCGCAGTTC AGCAAGTTCA GCGTCCGCCC CGGACGGCTG
CTGTGGTTCG GCGTCAAGGC AAAGCACCAG TACAACGTCA CCGTCACGCC CTCAGGACTA
GGACAACCGG TCAGCCTTCA GGGCACGTAC ATGCAATCGG CGCTGCTTCC CCGCTGGCTT
CAACGGCTCC TGATGTTCTT CGCAGCCGCA GCGGCGGCGA TCCTCGCGCT CTGGTTCGGC
ATCCACCCCT CCTTCGCCAC CACCGCTCAA GCCTCACCCC AGCCGACCAG CGCGAACGCG
CCGACCGTGA TCGTCATCCA GCCGACGCCG CCCTCGTCCC CGTCCAGCAG CCCGACGCCG
ACACCGACCC CGACGCCGAA GGCGCCCTCG AGTTCGGCCG CCGCGCCGCC CCCGGCGTCC
ACGTCCAAGG CCGCCCCGCC GCCGCCCGCG TCCAGCTCCA AGGCCGCTCC CCCGCCGCCG
GCGTCCAGCT CCAAGCCCGC GACCCCGCCG GCACAGATCA AGACGACCAA CATCCTCAAC
TTCGCGAGCA AGGCCTCGGT CGACCTGTAC CAGAGCAACT TCACCGACGG CCAGCAGGTC
GAGCTCTGGC AGACCCTGCA CAACGACGCC CAGAGCTGGA CGGTCTGGCT GTACCCCGAA
GACGGCTACA ACCTGGTCAT CCAGTCCACC GACAAGCCGG ACAGCGCCGG CACGAAGGTC
CTGCAGGTGG AACCGGACAG CCCCACCGAC GTCGACATCT CCGACGACTG GGGCGGGGTG
CAGGGCCTGC AAGCGCACTT GACCGGCGAC TACCAGGACT GGTCCCTGAC CTCCGTCCCG
GACAACCCCG ACAACCCGAA CGGCGCCTAC GGCGTGCTGA AGAACAAGCA CACCGGGACC
TGCCTGAGCA GCAAGGGTTC GGGGCAATAT CTCACGATGG CGCCGTGCAA CACCGGGGAC
AAGAACCAGT GGTTCTGGCT GTTCGCCCTC TGA
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| Protein sequence | MWVDLNPVAA DVEPGAEATV TITVRNTGDI VEEYHLQAAG DPARWGGIEP QTLRLYPGTT
GTAQLTFSPP RSSEAQAGPQ SYAVKVTPRE DRENTFAIEG VLRVAEFADL RAELLPSTTR
GWHRGKVRLA VDNYSNVVTS AAVSTTSTNS NLQVDIRTAA LRLQPGRAQF SKFSVRPGRL
LWFGVKAKHQ YNVTVTPSGL GQPVSLQGTY MQSALLPRWL QRLLMFFAAA AAAILALWFG
IHPSFATTAQ ASPQPTSANA PTVIVIQPTP PSSPSSSPTP TPTPTPKAPS SSAAAPPPAS
TSKAAPPPPA SSSKAAPPPP ASSSKPATPP AQIKTTNILN FASKASVDLY QSNFTDGQQV
ELWQTLHNDA QSWTVWLYPE DGYNLVIQST DKPDSAGTKV LQVEPDSPTD VDISDDWGGV
QGLQAHLTGD YQDWSLTSVP DNPDNPNGAY GVLKNKHTGT CLSSKGSGQY LTMAPCNTGD
KNQWFWLFAL
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