Gene Caci_4360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4360 
Symbol 
ID8335714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4948256 
End bp4948972 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID644957463 
ProductO-methyltransferase family 3 
Protein accessionYP_003115065 
Protein GI256393501 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.161564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCAGCACCCC GAGCACCCCG AGCATCCCAA GCGCCCCCAG CACCCTGCGC 
GACCCCCGCG TCGCCGAACC CCTCCGCCGC CTGTTCGCCG CCGCGCAGCA GGACGACGCC
GCCTACCAGC GCGCCCTGGC CCGCAGCCCC GAAGGCTTCA CCGACACCGA CGCCCAACAG
CGCGCCGACG CCTGGTCGGA GATCTACATG CCGATCTCCG CCGACGCCGG ACGCCTGCTC
TACACCCTCG TCCGCGCCGT GAAGCCGCGC ACCGTAATCG AGTTCGGCAT GTCCTACGGC
ATCTCCACGC TGCACCTGGC CGCCGCGGTC CGCGACAACG GCGTCGGGCA CGTGGTGACC
ACCGAGATGT CCGCGGCGAA GATCGAGGCG GCGCGCGCCA CATTCGAGGA AGCCGGACTG
CGGGACGTCG TCACCATCCT TCAAGGCGAC GCCCTCCAGA GCATCCCGAA GCATCTGGAC
GCCGACGGCG CCGGGTCGGA CGTGGACTTC GTCCTGCTGG ACGGATGGAA GGACCTGTAC
ACGCCGGTCC TGCGCGCCCT CGAACCGCAC CTGGTCCCCG GCGCCCTGGT CATCGCCGAC
GACACGAGCT TCGACTCGGT CCAGCCCTAC CTGGCCTACG TGCGCGACCC GGCCAACGGC
TACGAAGGCG TGACGTTCCC CGTTGAGGAC GGCATGGAAA TCAGCTGCCG CCTATGA
 
Protein sequence
MTSISTPSTP SIPSAPSTLR DPRVAEPLRR LFAAAQQDDA AYQRALARSP EGFTDTDAQQ 
RADAWSEIYM PISADAGRLL YTLVRAVKPR TVIEFGMSYG ISTLHLAAAV RDNGVGHVVT
TEMSAAKIEA ARATFEEAGL RDVVTILQGD ALQSIPKHLD ADGAGSDVDF VLLDGWKDLY
TPVLRALEPH LVPGALVIAD DTSFDSVQPY LAYVRDPANG YEGVTFPVED GMEISCRL