Gene Caci_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4357 
Symbol 
ID8335711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4945142 
End bp4945708 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID644957460 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003115062 
Protein GI256393498 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.457368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCG CCGACCAGCC ATTCGCGGAC CACTCCGCCG ACCAGCCCGC TGCCGACCAC 
CCCGCCGACC AGCCCTTCGA CGACCCCACC GACACCAGCC TCTGGCGCCC CCTCCACGCC
CTGGTGGCCT CCATAGACGC GGCCATCAGC CAGGTCTACG CCGACGCCGC CATCAAAGGC
GTCAAGCCCA CCTGGGTCCG CGAACTCCTC CGCCTCTACC GCACCGGCCC CATGACCATC
ACCGAACTAG CCGAAGCAGT AGACCGCACC CACTCAGCCC TCAGCCAAAA AGTCGCCGCC
ATGAAAGCCG CCGGCCTAGT CCGCACCACC CCCGGCCCCG ACGCCCGCAC CAAACACGTA
GACCTCACCC CCAAAGCCCG CCACCTAGCC CCCCGCCTAG CCGCCGAATG GCGCGCCACC
GAAGCCACCC TCGCCGACCT AGAAGCCGAA ATCCCCTACC CCATCACCCA AGCAGTCACC
GACATCGAAC AAGCCCTAGC CCGCAAGAGC TTCCACGACC GAATCACCGA GCGCCTGAGG
GAGGACCCCG CATGGCGTGG CGAATAG
 
Protein sequence
MPPADQPFAD HSADQPAADH PADQPFDDPT DTSLWRPLHA LVASIDAAIS QVYADAAIKG 
VKPTWVRELL RLYRTGPMTI TELAEAVDRT HSALSQKVAA MKAAGLVRTT PGPDARTKHV
DLTPKARHLA PRLAAEWRAT EATLADLEAE IPYPITQAVT DIEQALARKS FHDRITERLR
EDPAWRGE