Gene Caci_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4347 
Symbol 
ID8335701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4936005 
End bp4936580 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID644957450 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003115052 
Protein GI256393488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.685734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAT GGGAACCGAA CGCACGGGAA CGGCTGGTCC GCTCCGCGGT CGAACTGTTC 
GCGGAGCAGG GATACGAGGC GACGACGGTC ACCGAGATCG CCGAACGGGC CGGAGGGCTG
ACCAAGACCA CGTTCTTCCG GCACTTCGCC GACAAACGCG AGGTGCTGTT CGCCGGGCAG
GAGATCCACG GCCGGATCGT GGCCGAGGCG ATCGCCGAGG CGCCCGCATC GGCCACCCCC
CTGGAGATGG TCGGCCTGGC GCTGGACGGG CTCGCATCCT CGTTCACGGA GGACCGACGG
GACATCGGGC GCAAGCTTCG GACGGTCGTC GCGCACAGCG CGGAGTTGCA GGAGCGCTCC
GCCGCCAAGC GGGCGGCGCT CTCCGAGACG ATGGCGCGGG CACTTCGCAC GCACGGCGTC
TCGGAACTCG TTGCCGATCT CGCGGCCGAT CTGGGCGTGC GTGCGTTTTA TAGAGCGTTC
GACCAGTGGG CATCGTCAGC GGATTCGCGG ACTCTCGTCG AGTATGTGCC AGCGGTGTTC
AGTGAGTTGA AGACGGCTGT GTCCGTGCTC GAATAG
 
Protein sequence
MARWEPNARE RLVRSAVELF AEQGYEATTV TEIAERAGGL TKTTFFRHFA DKREVLFAGQ 
EIHGRIVAEA IAEAPASATP LEMVGLALDG LASSFTEDRR DIGRKLRTVV AHSAELQERS
AAKRAALSET MARALRTHGV SELVADLAAD LGVRAFYRAF DQWASSADSR TLVEYVPAVF
SELKTAVSVL E