Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4347 |
Symbol | |
ID | 8335701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4936005 |
End bp | 4936580 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644957450 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003115052 |
Protein GI | 256393488 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.685734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGAT GGGAACCGAA CGCACGGGAA CGGCTGGTCC GCTCCGCGGT CGAACTGTTC GCGGAGCAGG GATACGAGGC GACGACGGTC ACCGAGATCG CCGAACGGGC CGGAGGGCTG ACCAAGACCA CGTTCTTCCG GCACTTCGCC GACAAACGCG AGGTGCTGTT CGCCGGGCAG GAGATCCACG GCCGGATCGT GGCCGAGGCG ATCGCCGAGG CGCCCGCATC GGCCACCCCC CTGGAGATGG TCGGCCTGGC GCTGGACGGG CTCGCATCCT CGTTCACGGA GGACCGACGG GACATCGGGC GCAAGCTTCG GACGGTCGTC GCGCACAGCG CGGAGTTGCA GGAGCGCTCC GCCGCCAAGC GGGCGGCGCT CTCCGAGACG ATGGCGCGGG CACTTCGCAC GCACGGCGTC TCGGAACTCG TTGCCGATCT CGCGGCCGAT CTGGGCGTGC GTGCGTTTTA TAGAGCGTTC GACCAGTGGG CATCGTCAGC GGATTCGCGG ACTCTCGTCG AGTATGTGCC AGCGGTGTTC AGTGAGTTGA AGACGGCTGT GTCCGTGCTC GAATAG
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Protein sequence | MARWEPNARE RLVRSAVELF AEQGYEATTV TEIAERAGGL TKTTFFRHFA DKREVLFAGQ EIHGRIVAEA IAEAPASATP LEMVGLALDG LASSFTEDRR DIGRKLRTVV AHSAELQERS AAKRAALSET MARALRTHGV SELVADLAAD LGVRAFYRAF DQWASSADSR TLVEYVPAVF SELKTAVSVL E
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