| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4345 |
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| Symbol | |
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| ID | 8335699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4933747 |
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| End bp | 4934994 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957448 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003115050 |
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| Protein GI | 256393486 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.756748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTCCG ACCAACGCCT GGAGGATCTG CTCGCCGAGC TCAGGCCCGC GGTCCTCGGC
GCCCTGGTCC GACGGCACGG GCAGTTCGAC GGCTGCGAGG ATGCGGTGCA GGAGGCGCTC
GTCGCCGCGG CCACGCAGTG GCCAGCCGAG GGCGTTCCGG ACAACCCGCG CGCCTGGCTG
CTCACCGTCG CGGGGCGCCG CCTCACCGAC TATTGGCGCA GCGACCACGC GCGCCGCACG
CGCGAGGCCA CGGTCGCGGC CATGGCGGCG CCGGAATCCG CGTACGCTCC GGCGCCGGAC
GACGAGGAGC GGATCTCAGC CGACGACGAC ACCCTGATGC TGCTGTTCCT GTGCTGCCAT
CCGGTGCTCA GCCCGTCCTC GCAGGTGGCG CTGACGCTGC GGGCGGTCGG CGGACTTACC
ACCGAGGAGA TCGCGCAGGC GTTCCTGGTC CCGCAGACCT CGATGACGCG CCGCATCTCC
CGCGCCAAGC AGCAGGTCAA GGACGCAGGG CTGACGTTCC GCCTGCCGCC GCAGGCCGAG
CGTGCCGAGC GGACGCGCGC GGTCCTGCAC GTGCTGTACC TCATCTTCAA TGAGGGCTAC
ACCGCCACCG CCGGTCCGGA TCTGCTGCGT CCGGACCTCA CCGCCGAGGC GATCCGCCTG
ACCCGGCAGG TCCACCGCGT CCTGCCGGAG AACGGCGAGG TCGAGGGTCT GCTGGCGCTG
ATGCTCCTGA CCGAGGCGCG CAGCCCGGCG CGGACGCTGG CCGACGGGAC TCTGGTCCCG
ATGGCCGATC AGGACCGGTC GCTGTGGAAC GGCGATCTGG CCGAGGAGGG GTTGGCGTTG
GTGGTCGAGG CGCTGGCTCG GCCGGGCGTC GGTCCCTACC GCTTGCAGGC TGCGATCGCT
GCGGTGCACG TGGAGACGCC CGCCGACGGC ACGACGGACT GGCCGCAGAT CCTGGCGCTG
TACGACCTGC TGGAGCAGAT GGCGCCGAAC GCGGTGGTCC GCCTGAACCG GGCGGTGGCG
ATGGCGATGG TCGAGGGGGC GCGCGAGGGA CTGCGGCTGC TGGAGCCGCT GGAACAGGAC
CGATGGATGG CGGGCAACCA TCGGCTGAGC GCGGTGCGTG CCTACCTGCT GGAGATGGAC
GGCGATCGCG CCGGCGCGCG CGAGGCGTAC CGGACGGCGG CGCGACAGGC GGCGAGCGGG
CCGGAGCAGC GGTATCTACG GGAGCAGGCG GAGCGGTTGG GCGCCTGA
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| Protein sequence | MRSDQRLEDL LAELRPAVLG ALVRRHGQFD GCEDAVQEAL VAAATQWPAE GVPDNPRAWL
LTVAGRRLTD YWRSDHARRT REATVAAMAA PESAYAPAPD DEERISADDD TLMLLFLCCH
PVLSPSSQVA LTLRAVGGLT TEEIAQAFLV PQTSMTRRIS RAKQQVKDAG LTFRLPPQAE
RAERTRAVLH VLYLIFNEGY TATAGPDLLR PDLTAEAIRL TRQVHRVLPE NGEVEGLLAL
MLLTEARSPA RTLADGTLVP MADQDRSLWN GDLAEEGLAL VVEALARPGV GPYRLQAAIA
AVHVETPADG TTDWPQILAL YDLLEQMAPN AVVRLNRAVA MAMVEGAREG LRLLEPLEQD
RWMAGNHRLS AVRAYLLEMD GDRAGAREAY RTAARQAASG PEQRYLREQA ERLGA
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