Gene Caci_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4343 
Symbol 
ID8335697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4931804 
End bp4932169 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID644957446 
ProductYCII-related protein 
Protein accessionYP_003115048 
Protein GI256393484 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.467101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACC TGCTGCTGAT CTACGGCAAC GAGGAGAAGT GGGCTTCGAT CGCGACCGAG 
TCCCTGGACA AGGAGATCGC GAAGCAGGAC GCCTGGAACA CCCGCCATCT GGCCTCCGGC
GAGCTGCTGG CGGCCTATGG CCTCGGTGGC GAGAGTGAGG CGCAGCTGGT GCGGCGCAAG
GACGGCGCGC CCTTCGCCAC CGACGGTCCG TACCTGGAGT CCAAGGAGTT CGTCTGCAGC
CTCTACGTCA TCGACGTGGA GTCGCCCGAG CGGGCCCGCG AGATCGCCGC CGAGATGCCG
TGGGCGAACG TGCAGCCGAT CGAGATGTGG CCGATCCTGC ACGACGTGTT CGACGACAGG
CACTGA
 
Protein sequence
MKYLLLIYGN EEKWASIATE SLDKEIAKQD AWNTRHLASG ELLAAYGLGG ESEAQLVRRK 
DGAPFATDGP YLESKEFVCS LYVIDVESPE RAREIAAEMP WANVQPIEMW PILHDVFDDR
H