| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4339 |
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| Symbol | |
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| ID | 8335693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4928868 |
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| End bp | 4929500 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957442 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_003115044 |
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| Protein GI | 256393480 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.353241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGGTC CGCTGGACAA GCAGGAGATG GCCGCCCTGG TGGCCCGCGA CATCCCGCAC
GGAGCCTTCG TCAACCTCGG CATCGGTCTG CCGACCCTGG TCGCCGACCA CCTGCCCGCC
GACTCCGGCG TGGTCCTGCA CACCGAGAAC GGCATGCTCA ACATGGGCCC GGCGGCGCAC
GGCGAGGACA TCGACCCCGA CCTCACCAAC GCCGGCAAGG CGCCGGTGAC CGAGCTGCCC
GGCGCGTCCT ACTTCCACCA CGCCGATTCC TTCGCGATGA TGCGCGGCGG CCACCTGGAC
ATCTGCGTGC TGGGCGGCTT CCAGGTCTCG GCGTCCGGCG ATCTGGCCAA CTGGCACACC
GGGGAGCCCG ACGCGATCCC GGCCGTCGGC GGGGCGATGG ACTTGGCTAT AGGTGCGCGC
ACGGTGTTCG TGATGATGTC TCTGTTCACC AAGAGCGGCG AGCCCAAGCT GGTTCCGCGG
TGCACGTATC CGTTGACCGG ATTGGGATGC GTCGACCGTG TCTACACAGA CCGCGCGGTT
TTCGACGTCA CTCCGCGGGG TGTCGTCGTG CGCGAAGTCT TCGGCACTAC TGTCGAGGAA
CTCGCTGATC TCCTGGAGGT GCCGATCCGA TGA
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| Protein sequence | MSGPLDKQEM AALVARDIPH GAFVNLGIGL PTLVADHLPA DSGVVLHTEN GMLNMGPAAH
GEDIDPDLTN AGKAPVTELP GASYFHHADS FAMMRGGHLD ICVLGGFQVS ASGDLANWHT
GEPDAIPAVG GAMDLAIGAR TVFVMMSLFT KSGEPKLVPR CTYPLTGLGC VDRVYTDRAV
FDVTPRGVVV REVFGTTVEE LADLLEVPIR
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