| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4325 |
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| Symbol | |
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| ID | 8335679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4909408 |
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| End bp | 4913439 |
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| Gene Length | 4032 bp |
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| Protein Length | 1343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957428 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003115030 |
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| Protein GI | 256393466 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.107286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCCA TGATGCGCCC AGTCCGCACG CTGCTCTGTA CCGCTCTCGT CCTCGCTCTT
GCCCCGGCCG CCGCCTACGC CAACTCGCCC GCGAGCGCAC CGACCGCCGC GCCGCCGGGT
GCTGCCCAAA CCGGGCAGCC GATTTACCTC GACACCCACT ACTCGTTCGC CGAGCGGGCG
GCGGACTTGG TGTCGCGGAT GACGTTGCCG GAGAAGGCCG CGCAGTTGCA GACCAACAGC
GCGCCGGCGA TTCCGCGTCT GGGCGTGCAG GAGTACACGT ACTGGAGCGA GGGGCAGCAC
GGGGTCAACA CCTTGGGCGC CGACTCCAAC CGCGGCGACG TTACCGGAGG CGTGCACGCG
ACGAGCTTCC CGGTGAACTT CGCCGCGACG ATGAGCTGGG ATCCGGCGCT GACTTATAAG
GAGACCACCG CGGTTTCCGA TGAGGTGCGC GGGTTTCTGG ACAAGTCGCT GTGGGGGACC
GGGCAGAACA ACCTGGGACC GTCGGCGAGC GACTATGGCG CGCTGACGTT CTGGGCGCCG
AACGTCAACA TGGACCGCGA TCCGCTGTGG GGGCGTACGA ACGAGTCCTT CGGCGAGGAC
CCCTACCTCA CCTCCACGAT GGCCGGCGCG TTCGTCGACG GCTATCAGGG CCAGAGCATG
ACCGGGCAGC AGCAGACCCC TTATTTGAAG GTCGCCGCCA CCGCCAAGCA CTACTCGCTG
AACAACATCG AGGACAGCCG GCACACCGGC AGCTCGGACA CCACGGATGC GAACATCCGT
GACTACTACA CCAAGCAGTT CGCCAGCCTG GTGCGGGACG CGCACGTCTC GGGCATCATG
ACCTCCTACA ACGCGGTGAA CGGCACGCCG TCCCCGGCGG ACACCTACAC CGTCGACGAA
CTCCTGCAGG CCACCTACGG CTTCGCCGGC TACACCACCT CCGACTGCGG CGCGATCGGC
GACGTCTACG GCGCCGCCTC CCACGGCTGG GCTCCGCCGG GCTGGACCAG CAACGGCACC
AGCTGGACCA ACAACGCCAC CGGCCGGCAG ATCTCGGCGG CGGCCGGCGG GCAGGCCTTC
GCGATCCGCG CCGGCACGCA GCTCAACTGC GCCGGCGGGG AGATGACCGC GCAGAACATC
AGCGCCGCCA TCGACCTCGG GCTGCTCTCG AACGGGGTCG TCGACGCCAC CTTGACCCGG
CTGTTCACGG TGCGGATGGA GACCGGCGAG TTCGACCCGG CGGGCAAGGT CGGCTACACC
AAGATCACCA AGGACCAGAT CGAGTCCCCG GCGCACCAGG CGCTCGCCGA GCAGGTCGCC
GCGAACGACA TCGTGCTACT GCAGAACGGC GCGGTGTCCG GGACGTCGGC CAAGCTGCTG
CCGGTCGACC CGGCGAAGAC CGACAGCGTC GTGATCGTCG GCGACCTGGC GAACAAGGTG
ACGCTCGGCG GGTACTCCGG CGAACCGACG CACGAAGTGA ACGCCGTGCA GGGCATCACC
GCGGCGGTCC AGGCCGCCAA CCCCTCGGCG ACCGTCACCT TCGACGCCTG CGGGACCGGA
ACACAGATCA CCACTCCGGC GTCCTGCTCG GCCGCGACCC AAGCGGCGAT CAAGAGCGCG
AGCCTGGTGC TGGTGGTCGC CGGCTCCGAC CTGAGCGTGG CCGACGAGGC CAACGACCGC
AGCACCCTGG CTCTGCCGGG CAACTACGAC TCGCTGATCA GCCAGGTCTC CGCGCTGGGC
AACCCGCGCA CCGCGCTGGT GATGCAGGCG GATGGTCCCT ACGACATCCA GGACGCGCAG
AAGGACTTCC CGGCGATCGT GTTCAGCGGC TACAACGGCC AGAGCCAGGG CACCGCGCTG
GCGCAGGTGC TGTTCGGGCA GCAGAACCCC GCCGGGCATC TGGACTTCAC CTGGTACTCC
GGGGACTCCC AGCTGGCGCC GATGGACAAC TACGGGCTGA CTCCCTCGCA GACCGGCGGG
CTCGGGCGGA CCTACCAGTA CTTCACCGGT ACGCCGACCT ACCCGTTCGG CTACGGCCAG
TCGTACTCCA GCTTCGCGTA CTCCCACGTG CAGGTCGGTC CGCAGAACAC GAACGCCGAC
GGGACCGTGC ACGTCTCCTT CGACGTGAAG AACACCGGAA CCGTCGCCGG TACCACGGTC
GCGCAGCTGT ACGCCGCACC TCCCGGCGCC GGGACCAACG ACACCACGCG CGAGCAGCTC
GCCGGATTCC AGAAGACGAA CACGCTCAAG CCGGGCCAGA GCCAGCACAT CTCCTTGTCG
GTCAAGGTCT CCAGCCTCAG TACGTGGGAC GAGAGCAGCC TCAAGCAGGT CGTGGCTGAC
GGCGCGTACC AGTTCCGGGT CGGTCCGGAC TCGGCGACGA CCGCCGGTTC CGGCACGGTG
AACGTGCACG GCACGATGAC GCCACACGTG CAGTCCGTCG CCGTCCAGCC CGACCAGGTG
GTCTTCACCG CGGGCCAGAC GCTGGACCTC ACCGGCGCCA ACCCCTGGAT CGCGCCCGAC
ACCAACGCCT CGCTGGAGCA GAACCACGCG CCGGCGGCGA ACATCGTCGA GGCGGCGAAC
GACGACCAGT CCTTCGCCGA CCTGGCGCAC TCTCATGTCC GCTACAGCAC CAGCGACCCG
AAGGTCGCCA CGGTCAGCGC CGCCGGCGTG GTCACCACGC ACGCGCCGGG CGCGGCGACG
ATCAACGTGA CGGTGAACGG CGTGACCGGC ACCGCCCCGA TCGTCGTGCG GGACCCGTTC
ACGCTCCAGG CGCCGGCGAT CGTGAAGCCG GCGACCTCGA TCACCGCGAC CGAGACGTTC
ACCAACTCCG GCGACAAGGC GGTGCGCGAT GTGCGGTTCG GTCTGACCAC GCCGTCGGGC
TGGACCGCGA CGGCGAACTC GCCGGTCTCG GTGTCCAGCG TCGCGCCCGG CCAGACGGTG
ACGGCCAGGT GGAGCGTCGC GGTCCCGGCG ACAGCCAGCC CGGGGACGCA GACCGAGCTT
GATGCCACCA CCACACTGAC CGGCGCGGCC GGTTCCTACA CCGAGAACTC GGTCAGCGCA
GTCACGGTGA CCTCCGGCGC CACGCCGCAG CAGGCCACGC CGGTCATCAC CGGGACGAGC
CCGGCGGCCG GGTCCTTGCA GGTGGTGCTG AACAACCCCT CGGACACCGC GACCTCGGTG
ACGGCGGTCA AGTGGCAGCT CGGCAGCCTG TCGGGCACCG CGCCGGTCAG CGCGACGATC
GCCGCCGGGG CGTCGACCAC GGTGACGGTT CCGGTGACCG GTATCAGTTT CGCGACCATC
TACCCGCTGA CGGTCAGCAG CGTCATCTCC GGCGGCTTGG CCTCGGAGCC GCTGAGCGGA
CACGTCACGT TCCTGCCGGT GGTGAACAAG TCCCTGGGCA GTTCCTGGAC GCTGGACCAG
GTCCAGGACG GTCCGTCGGT GAACCTGTCG ACCTCCGCGG ACGGGACCTG GGGATCGTTG
GACGGCTCCC TGCCGTACGG CGGCGATTCC TACCTGTCGG GCAAGATGTG GTTCGACTGG
GACGCTCAGA ACCTTTACGT CACCGCCGAT ATGACCGAGG CTGCGTTCTC ACAGACCAAT
ACCGCCGGGG ACATCTGGAA GGGCGACAGC ATGCAGGTAT CGGCGACGTC AGGGATTCCG
GGATCGTCGG TCGCCACGAG CGATGAATCC CTTGAGGGAC ACTACGAATA CGGCGCTGCT
CTGACTCCTG CCGGGTCGCA GCTCTACCGC TGGATCAGCC CGTCGCAGGG TGCCGGTCTG
GTCACCGACG CCTCGGTGAA CGTCACCCGG GACGAGGCGA ACCACACCAC GCTGTACGAG
GTGGCGATCC CGTGGAGCGA TCTCACCTCG CTGGCGCCGA CGGCGAACAG CGTGTTCTCC
ATCTCGGCGA TGTTCAACAA CGTGGACACC GGCGTACGGA ACGGCTACCT GCAGTGGGGC
GGCGGCATCG GCGACAACAA GAACGTCGCC GAGTTCAACA TGGCGCAGCT GATGCCGGCG
GCCGGGTCGT GA
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| Protein sequence | MHPMMRPVRT LLCTALVLAL APAAAYANSP ASAPTAAPPG AAQTGQPIYL DTHYSFAERA
ADLVSRMTLP EKAAQLQTNS APAIPRLGVQ EYTYWSEGQH GVNTLGADSN RGDVTGGVHA
TSFPVNFAAT MSWDPALTYK ETTAVSDEVR GFLDKSLWGT GQNNLGPSAS DYGALTFWAP
NVNMDRDPLW GRTNESFGED PYLTSTMAGA FVDGYQGQSM TGQQQTPYLK VAATAKHYSL
NNIEDSRHTG SSDTTDANIR DYYTKQFASL VRDAHVSGIM TSYNAVNGTP SPADTYTVDE
LLQATYGFAG YTTSDCGAIG DVYGAASHGW APPGWTSNGT SWTNNATGRQ ISAAAGGQAF
AIRAGTQLNC AGGEMTAQNI SAAIDLGLLS NGVVDATLTR LFTVRMETGE FDPAGKVGYT
KITKDQIESP AHQALAEQVA ANDIVLLQNG AVSGTSAKLL PVDPAKTDSV VIVGDLANKV
TLGGYSGEPT HEVNAVQGIT AAVQAANPSA TVTFDACGTG TQITTPASCS AATQAAIKSA
SLVLVVAGSD LSVADEANDR STLALPGNYD SLISQVSALG NPRTALVMQA DGPYDIQDAQ
KDFPAIVFSG YNGQSQGTAL AQVLFGQQNP AGHLDFTWYS GDSQLAPMDN YGLTPSQTGG
LGRTYQYFTG TPTYPFGYGQ SYSSFAYSHV QVGPQNTNAD GTVHVSFDVK NTGTVAGTTV
AQLYAAPPGA GTNDTTREQL AGFQKTNTLK PGQSQHISLS VKVSSLSTWD ESSLKQVVAD
GAYQFRVGPD SATTAGSGTV NVHGTMTPHV QSVAVQPDQV VFTAGQTLDL TGANPWIAPD
TNASLEQNHA PAANIVEAAN DDQSFADLAH SHVRYSTSDP KVATVSAAGV VTTHAPGAAT
INVTVNGVTG TAPIVVRDPF TLQAPAIVKP ATSITATETF TNSGDKAVRD VRFGLTTPSG
WTATANSPVS VSSVAPGQTV TARWSVAVPA TASPGTQTEL DATTTLTGAA GSYTENSVSA
VTVTSGATPQ QATPVITGTS PAAGSLQVVL NNPSDTATSV TAVKWQLGSL SGTAPVSATI
AAGASTTVTV PVTGISFATI YPLTVSSVIS GGLASEPLSG HVTFLPVVNK SLGSSWTLDQ
VQDGPSVNLS TSADGTWGSL DGSLPYGGDS YLSGKMWFDW DAQNLYVTAD MTEAAFSQTN
TAGDIWKGDS MQVSATSGIP GSSVATSDES LEGHYEYGAA LTPAGSQLYR WISPSQGAGL
VTDASVNVTR DEANHTTLYE VAIPWSDLTS LAPTANSVFS ISAMFNNVDT GVRNGYLQWG
GGIGDNKNVA EFNMAQLMPA AGS
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