| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4309 |
|---|
| Symbol | |
|---|
| ID | 8335663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4888577 |
|---|
| End bp | 4888981 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644957412 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003115014 |
|---|
| Protein GI | 256393450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.373076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000818379 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATG CGCTTATGTG GAGCCCCAAC AACGGCTCCG GCTCCGAAGC CACGGTCGTC
GAGGTCTTCT CGAAGTGGCT CGCCGAGCAG GGCTGGGAGT TGACACGGCT TCCCGCGCAC
GGGGACTACC CGGACATCGA CGCCCGGCAT CCCGACGGCC GACGGCTCGT CGTCGAGGCG
AAGGGCTTCA CCCGCGACTC GAGCACCGAC CTGGACGCCG GCTACGGCCA GCTCCTGCGC
CGGATGAAGG GCGAACCGGC CACCACGTAC GCGCTCGTGG TGGCCGGGAC GGTCGTCCGA
TTCGCACAGC GGGTCCCCTC CGAGGTACGG AGTGCGCTGG GGATCTCGCT CTACACGGTC
GACTTCACGG GAAAGGTCGC GCTCGTCGAC GGTTCACCGC TGTGA
|
|---|
| Protein sequence | MSDALMWSPN NGSGSEATVV EVFSKWLAEQ GWELTRLPAH GDYPDIDARH PDGRRLVVEA
KGFTRDSSTD LDAGYGQLLR RMKGEPATTY ALVVAGTVVR FAQRVPSEVR SALGISLYTV
DFTGKVALVD GSPL
|
|---|
| |