| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4308 |
|---|
| Symbol | |
|---|
| ID | 8335662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4887626 |
|---|
| End bp | 4888537 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644957411 |
|---|
| Product | Taurine dioxygenase |
|---|
| Protein accession | YP_003115013 |
|---|
| Protein GI | 256393449 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.677541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00107302 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA CTCCGACCGA CTTCGACATC CGGCGCATAG GCGGCCGCAT CGGCGCTGAG
ATCACCGGCG TGGACCTCGC CGGCAACCTG GACGAGGGCA TCCTGAAGGA GGTGAAGGCG
GCGCTGCTGG AGCACAAGGC GCTGGTGTTC CGCAATCAGA ACCTTGATGA CGAAGGCCAG
CTCCGCTTCG CCTCGCAGTT CGGCCCGCTC ACCAGCGCGC ACCCGACCGT CCCCGGCATC
GCCGAGCAGC CGCAGATCCT GCCGGTGGAC AGCGAGCGCG GCGCGGCGAA CGTGTGGCAC
ACCGACGTTA CGTTCGTGCA GTCGCCGCCG AAGGCCTCCA CGCTGCGCGG CATCGTGATC
CCGCCCTACG GTGGCAACAC CCTGATCGCC AACACCGCGG CGGCGTACCG CGACCTGCCC
AAGCCGCTGC GCGACCTGGC GGACACGCTG TGGGCCGTGC ACACCAACGA CTACGACTAC
GCCGGTCCGA AGGGCGACGA CGAGAAGCGG CAGCAGTACC GCGACGTGTT CGTCTCCACG
AAGTACCGCA CGGCGCACCC GGTCGTGCGC GTGCACCCCG AGACCGGCGA GCGCGGGCTG
TTCATCGGCG CGTTCGCGCA GACCATCGAA GGGCTGAGCA CGACCGAGTC GAAGGACGTG
CTGCGCCTGC TGCAGGCGTA CGTCAACCGG CCGGAGAACG TGCTGCGGGT CCAGTGGAAC
CCCGGCGACG TGGTGATCTT CGACAACCGC ATCACCCAGC ACTACGCGCC CGACGACTAC
GACACGCTGC CCCGCCGCCT CAACCGCGTC ACCATCGCCG GCGACGTCCC GGTCGGCATC
GACGGGTCGA GCAGCCGCAT CCTGGAGGGC GACGAAGCGG CGCACTACAC GCCGGCGACG
GCGGCGTCCT GA
|
|---|
| Protein sequence | MTTTPTDFDI RRIGGRIGAE ITGVDLAGNL DEGILKEVKA ALLEHKALVF RNQNLDDEGQ
LRFASQFGPL TSAHPTVPGI AEQPQILPVD SERGAANVWH TDVTFVQSPP KASTLRGIVI
PPYGGNTLIA NTAAAYRDLP KPLRDLADTL WAVHTNDYDY AGPKGDDEKR QQYRDVFVST
KYRTAHPVVR VHPETGERGL FIGAFAQTIE GLSTTESKDV LRLLQAYVNR PENVLRVQWN
PGDVVIFDNR ITQHYAPDDY DTLPRRLNRV TIAGDVPVGI DGSSSRILEG DEAAHYTPAT
AAS
|
|---|
| |