| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4303 |
|---|
| Symbol | |
|---|
| ID | 8335657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4882893 |
|---|
| End bp | 4883531 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957406 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_003115008 |
|---|
| Protein GI | 256393444 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | [TIGR03567] FMN reductase, SsuE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0468815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00179271 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCGA TCCTGGCTGT CTCCGGCAGC CCGTCACCGG CCTCGCGCAC GGTCGCCGCC
CTCGACCACG CGCTGGCCCG GCTGACGGCG CACGGCCACA CCACGACCCA CCTGGCCGTC
CGCGACCTGC CGGCGGCGGA CCTGCTGGCC GGAGCGCGCA CCGCGCCCGC CGTGCGGGAG
GCGATCGCCG CGGTCGCCCA CGCCGACGGC GTCATCGTCG CCACGCCGAT CTATAAGGCC
TCGTACACCG GACTGCTGAA AGCGTTCCTG GACCTGCTGC CGGAGAACGC GCTGGCGGGC
AAGGTCGTCC TGCCGGTGGC CACCGGCGGC ACGGTCGGCC ACCTGCTGGC GATCGACTAC
GCCCTGCGTC CCGTGCTCAC CGCGCTGGGC GCCGACCACG TCGTGCCGGG CCGGTTCCTG
CTGGACGCCG ACATCATCCG CGGTGAATCA GGGGACGCAT ATCTGGTTCC CGAGGCGGAA
AGGCGGCTGA CGAAAACCCT TGACCGGTTC ACCGAGGCGC TGACCCGCCG TGACGTCGAT
GTTGATGTTG ATATAGATGT CGAAATCGAT GCAGACGTCG ACATCGAAAC CGCAGCCCTG
GCCCTGGCCA ACGGCGTCGC CGTGGCGGTC GCGCGATGA
|
|---|
| Protein sequence | MPSILAVSGS PSPASRTVAA LDHALARLTA HGHTTTHLAV RDLPAADLLA GARTAPAVRE
AIAAVAHADG VIVATPIYKA SYTGLLKAFL DLLPENALAG KVVLPVATGG TVGHLLAIDY
ALRPVLTALG ADHVVPGRFL LDADIIRGES GDAYLVPEAE RRLTKTLDRF TEALTRRDVD
VDVDIDVEID ADVDIETAAL ALANGVAVAV AR
|
|---|
| |