Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4299 |
Symbol | |
ID | 8335653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4877803 |
End bp | 4878828 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957402 |
Product | transport system permease protein |
Protein accession | YP_003115004 |
Protein GI | 256393440 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4779] ABC-type enterobactin transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.352275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000200098 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGGGTTC TGCGAACCAC TGCTTTGTCA GTGCGGTATC GGCCTCGGGC GCTCACCGCT TCGGTTGCCT GCCTGGTGCT CGCTTTCGCC GCCATGGTCA TCACGCTCGG CAGCGGGGAC TACCGGATCC CGCCGGGTGA GGTGCTGCGC ACGCTGGCTG GTGGCGGCAC GGTGGCTGAC CACTTCATCG TGGTTCAGTT GCGTTTGCCG CGCGTGGTGA CCGCGCTGCT GGTCGGAGGT GCGCTGGCGC TTGCCGGAGC GGCGTTCCAG TCGCTGGTCC GCAATCCGTT GGGGAGCCCG GACATGCTCG GGTTCACCGA GGGTGCGGCG ACCGGTGCGC TGGTCGTGGT GGTGGCCGGC GGGAGCAGTC TGGCGCTCGC GGGCGGGGCG ATGATCGGCG GTGTCGCGAC CGGGGTCGGG GTCTACGCGC TCGCTTGGCG TCGCGGGGTG CACGGCTATC GGCTGATCCT GACGGGCATC GGGGTCTCGG CGATTCTGAG CGGGGTCAAC GGCTATCTGA TGACCAAGGC GCAGTTGATG GACGCCGCGC GGGCGATGCT GTGGCTGACC GGGAGTCTGG ACGGTCGCGG GTGGAGCGAC GTCGTGCCGT TGGCGGTCGC GATGGTGGTG CTCGTGCCGG TGGTCGTCGC CGGATGCGGC AGGGCGCTGC ACATCATCGA GATGGGTGAC GATGTGGCGC GGGCGCTGGG GATCTCGGTG GAGCGCGTGC GCCTGATGAC GCTGGCCGCC GCGGTCCTGC TCACCTCGTT CGCCGCGGCG GCGGCCGGGC CGGTCTCGTT CGTCGCGCTC ACGGCGCCGC AGTTGGCCCG GCGGCTGACC CGCGCGCCGG GACCCAACCT GATCCCGTCG ATGCTGCTCG GGTCGGTGCT CCTGACGTGC GCCGATCTCG TTGCCCAGCA TGCGGTTCCC GGGCGGCAGC TGCCGGTCGG GGTGGTCACC GGGGTGCTCG GCGGCGGCTA TCTGATCTGG CTGCTGGCGG CCGGACGACG TGCCGGACGG ATCTGA
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Protein sequence | MRVLRTTALS VRYRPRALTA SVACLVLAFA AMVITLGSGD YRIPPGEVLR TLAGGGTVAD HFIVVQLRLP RVVTALLVGG ALALAGAAFQ SLVRNPLGSP DMLGFTEGAA TGALVVVVAG GSSLALAGGA MIGGVATGVG VYALAWRRGV HGYRLILTGI GVSAILSGVN GYLMTKAQLM DAARAMLWLT GSLDGRGWSD VVPLAVAMVV LVPVVVAGCG RALHIIEMGD DVARALGISV ERVRLMTLAA AVLLTSFAAA AAGPVSFVAL TAPQLARRLT RAPGPNLIPS MLLGSVLLTC ADLVAQHAVP GRQLPVGVVT GVLGGGYLIW LLAAGRRAGR I
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