Gene Caci_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4299 
Symbol 
ID8335653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4877803 
End bp4878828 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID644957402 
Producttransport system permease protein 
Protein accessionYP_003115004 
Protein GI256393440 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.352275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000200098 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGGGTTC TGCGAACCAC TGCTTTGTCA GTGCGGTATC GGCCTCGGGC GCTCACCGCT 
TCGGTTGCCT GCCTGGTGCT CGCTTTCGCC GCCATGGTCA TCACGCTCGG CAGCGGGGAC
TACCGGATCC CGCCGGGTGA GGTGCTGCGC ACGCTGGCTG GTGGCGGCAC GGTGGCTGAC
CACTTCATCG TGGTTCAGTT GCGTTTGCCG CGCGTGGTGA CCGCGCTGCT GGTCGGAGGT
GCGCTGGCGC TTGCCGGAGC GGCGTTCCAG TCGCTGGTCC GCAATCCGTT GGGGAGCCCG
GACATGCTCG GGTTCACCGA GGGTGCGGCG ACCGGTGCGC TGGTCGTGGT GGTGGCCGGC
GGGAGCAGTC TGGCGCTCGC GGGCGGGGCG ATGATCGGCG GTGTCGCGAC CGGGGTCGGG
GTCTACGCGC TCGCTTGGCG TCGCGGGGTG CACGGCTATC GGCTGATCCT GACGGGCATC
GGGGTCTCGG CGATTCTGAG CGGGGTCAAC GGCTATCTGA TGACCAAGGC GCAGTTGATG
GACGCCGCGC GGGCGATGCT GTGGCTGACC GGGAGTCTGG ACGGTCGCGG GTGGAGCGAC
GTCGTGCCGT TGGCGGTCGC GATGGTGGTG CTCGTGCCGG TGGTCGTCGC CGGATGCGGC
AGGGCGCTGC ACATCATCGA GATGGGTGAC GATGTGGCGC GGGCGCTGGG GATCTCGGTG
GAGCGCGTGC GCCTGATGAC GCTGGCCGCC GCGGTCCTGC TCACCTCGTT CGCCGCGGCG
GCGGCCGGGC CGGTCTCGTT CGTCGCGCTC ACGGCGCCGC AGTTGGCCCG GCGGCTGACC
CGCGCGCCGG GACCCAACCT GATCCCGTCG ATGCTGCTCG GGTCGGTGCT CCTGACGTGC
GCCGATCTCG TTGCCCAGCA TGCGGTTCCC GGGCGGCAGC TGCCGGTCGG GGTGGTCACC
GGGGTGCTCG GCGGCGGCTA TCTGATCTGG CTGCTGGCGG CCGGACGACG TGCCGGACGG
ATCTGA
 
Protein sequence
MRVLRTTALS VRYRPRALTA SVACLVLAFA AMVITLGSGD YRIPPGEVLR TLAGGGTVAD 
HFIVVQLRLP RVVTALLVGG ALALAGAAFQ SLVRNPLGSP DMLGFTEGAA TGALVVVVAG
GSSLALAGGA MIGGVATGVG VYALAWRRGV HGYRLILTGI GVSAILSGVN GYLMTKAQLM
DAARAMLWLT GSLDGRGWSD VVPLAVAMVV LVPVVVAGCG RALHIIEMGD DVARALGISV
ERVRLMTLAA AVLLTSFAAA AAGPVSFVAL TAPQLARRLT RAPGPNLIPS MLLGSVLLTC
ADLVAQHAVP GRQLPVGVVT GVLGGGYLIW LLAAGRRAGR I