Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4298 |
Symbol | |
ID | 8335652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4876748 |
End bp | 4877806 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957401 |
Product | transport system permease protein |
Protein accession | YP_003115003 |
Protein GI | 256393439 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.991157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000018785 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGTCCGCCA CCGCACCACC GCAGACCCCT GAGACCATCA GTGCGACGCC CCGCGCCCGA CCACCCGGCG CGGTTCGCCT GAGTCGGGGC GCGGGCCTGA TCGTCGCGGC CGGGCTGCTG CTCGCCGTGG CCGTCCTCAG CATCTGCCTC GGCGCGAAGT CGCTCTCGCT CGCCGACGTC TGGCACGGCT TGTCCGACCC GGGCTCCGCG TCCTACACGG TGGTTCATCA GATGCGGCTG CCACGCACGC TGCTCGGGCT GCTCGTCGGA CTGGCGCTGG GACTGGCCGG CGCGGTGATG CAGGCGCTGA CCCGCAATCC GCTGGCCGAT CCGGGGCTGC TGGGCATCAA CGCCGGTGCG TCGGCCGCGG TCGTCACCTC GATCTGGCTG TTCGGGATCG GGACGTTCGA CGGCTACATC TGGTTCGCCT TGGGCGGTGC GGCGATCGCG ACCACCGCCG GATATCTCGT CGGCGGTGGG CGTTCGGCGA CGCCGGTGCG GCTGGCGCTG GCTGGTGCGG CGCTGAACGC CACGCTGTTC TCCTACGTCA GCGTCGCGAT GCTGCTGGAC TCCGCGTCGC TGGAGGCGAT GCGGTTCTGG ACGGTCGGAT CGTTGGCGAA CGCGACGCCT TCGACGGTCG TCAGGGTTCT GCCGTTCGTC GCCGTCGGGT TGGTGCTGGC GCTGGGATTG GCCAGGCCGC TCAATGCTTT GGCGCTCGGT GAGGACTCGG CGCGGGCTCT GGGTTCGCGG CCGACCGCGG TGCGCGCGGT GGCGATCGTC GCGGTGACGC TGCTGTGCGG GGCGGCGACG GCGGCGTGCG GGCCGATCGT GTTCGTCGGG CTGATGGTGC CGCATGTGGT GCGCACCATT ACCGGTCCGG ACCTGCGGTG GCTGCTGCCG TACTGCGCGG TGCTGGCGCC GGTCGTGCTG CTCGGGGCGG ACGTGCTCGG GCGGATTCTG GCCCGGCCCG GGGAGATCCA GGTCGGGGTC GTGACCAGTG TGGTCGGCGG TCCGGTGTTC TTGTACTTCC TGCGGCGCGC GAAGGCGGTG CGGGCATGA
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Protein sequence | MSATAPPQTP ETISATPRAR PPGAVRLSRG AGLIVAAGLL LAVAVLSICL GAKSLSLADV WHGLSDPGSA SYTVVHQMRL PRTLLGLLVG LALGLAGAVM QALTRNPLAD PGLLGINAGA SAAVVTSIWL FGIGTFDGYI WFALGGAAIA TTAGYLVGGG RSATPVRLAL AGAALNATLF SYVSVAMLLD SASLEAMRFW TVGSLANATP STVVRVLPFV AVGLVLALGL ARPLNALALG EDSARALGSR PTAVRAVAIV AVTLLCGAAT AACGPIVFVG LMVPHVVRTI TGPDLRWLLP YCAVLAPVVL LGADVLGRIL ARPGEIQVGV VTSVVGGPVF LYFLRRAKAV RA
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