Gene Caci_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4293 
Symbol 
ID8335647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4871157 
End bp4871708 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID644957396 
Producthypothetical protein 
Protein accessionYP_003114998 
Protein GI256393434 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.49385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000790517 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAGTT TCCGTCCCGT CGATGTGGAT TCCGACGCCG AGATGGAGAT GCTGCATCGC 
TGGGTCACGC ATCCGAAAGC GGCGTTCTGG CTGATGCAGG ACTTCGATGT CGAGCAGGTC
CGCGAGGAAT ACCGACGGAT ATCCGAGCAT CCGCATCACG AAGCGTTCCT CGGTCTGGTT
GACGGAAATC CGGCGTTCCT CGCCGAACGC TACGACCCCG GCCACGTCGA GCTGGTCGGG
CTGTACGAGC CCGAGGACGG CGACGTCGGC ATGCACTTCC TGTGCGCGCC CACCGACACG
CCGGTCCACG GTTTCACTCG TACGGTCATC ACCGCTGTGC TGGCGTGGAT CTTCGCCGAC
CCGGACGCGC TGCGCGTGGT CGTCGAGCCG GACGTGCGCA ACACCGCGGT CCACGCGCTC
AACGCGGCGG TCGGCTTCCG TGTCGTCGGC CCGATCGCCA AGCCCGAGAA GCAGGCGCTG
TTGAGCGTCT GCACCTGGCA CGACTTCCAA TCCGCCACCT CTGCCCTCCC GCGCCTAGGA
GCGAGCCTGT GA
 
Protein sequence
MISFRPVDVD SDAEMEMLHR WVTHPKAAFW LMQDFDVEQV REEYRRISEH PHHEAFLGLV 
DGNPAFLAER YDPGHVELVG LYEPEDGDVG MHFLCAPTDT PVHGFTRTVI TAVLAWIFAD
PDALRVVVEP DVRNTAVHAL NAAVGFRVVG PIAKPEKQAL LSVCTWHDFQ SATSALPRLG
ASL