Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4293 |
Symbol | |
ID | 8335647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4871157 |
End bp | 4871708 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644957396 |
Product | hypothetical protein |
Protein accession | YP_003114998 |
Protein GI | 256393434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.49385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000790517 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCAGTT TCCGTCCCGT CGATGTGGAT TCCGACGCCG AGATGGAGAT GCTGCATCGC TGGGTCACGC ATCCGAAAGC GGCGTTCTGG CTGATGCAGG ACTTCGATGT CGAGCAGGTC CGCGAGGAAT ACCGACGGAT ATCCGAGCAT CCGCATCACG AAGCGTTCCT CGGTCTGGTT GACGGAAATC CGGCGTTCCT CGCCGAACGC TACGACCCCG GCCACGTCGA GCTGGTCGGG CTGTACGAGC CCGAGGACGG CGACGTCGGC ATGCACTTCC TGTGCGCGCC CACCGACACG CCGGTCCACG GTTTCACTCG TACGGTCATC ACCGCTGTGC TGGCGTGGAT CTTCGCCGAC CCGGACGCGC TGCGCGTGGT CGTCGAGCCG GACGTGCGCA ACACCGCGGT CCACGCGCTC AACGCGGCGG TCGGCTTCCG TGTCGTCGGC CCGATCGCCA AGCCCGAGAA GCAGGCGCTG TTGAGCGTCT GCACCTGGCA CGACTTCCAA TCCGCCACCT CTGCCCTCCC GCGCCTAGGA GCGAGCCTGT GA
|
Protein sequence | MISFRPVDVD SDAEMEMLHR WVTHPKAAFW LMQDFDVEQV REEYRRISEH PHHEAFLGLV DGNPAFLAER YDPGHVELVG LYEPEDGDVG MHFLCAPTDT PVHGFTRTVI TAVLAWIFAD PDALRVVVEP DVRNTAVHAL NAAVGFRVVG PIAKPEKQAL LSVCTWHDFQ SATSALPRLG ASL
|
| |