| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4280 |
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| Symbol | |
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| ID | 8335634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4854667 |
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| End bp | 4856151 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957383 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003114985 |
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| Protein GI | 256393421 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.104165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATC CCCTCGTGCG CTTGCGCCGC ACCACTCTCG TCCTCGCGGC CGGCGCGCTC
GCGGTCGCGG CGACCAGCGG TTTCGCCGCC TACGCCGCGG CTGCCAGCCC GGCTGCGGCC
GCCGCTGCCA CCCAGAGCGC GCCGTCAGCC GCCGCCCCGC CGAGCAGCTT CCACGGCGTG
AACTGGGCCG ACCCCCGCGA CAACTACGCC AGCGACGCCG TCGTCCCCAG CGGCCTGAGC
GTCACCGACG ACTACCGCAC CGTCTACCGC ACGACCCAGA AAATGGTCGA CGGCTTCCGC
ACCAACCTCG GTGCCAACAC CCTGCGACTC CCGATCAACC CCGCGAGCGT CGGCACCGCC
TGGTGGAAGT CCTACCGCGC GACGATCGAC GCCGCGACCG CGTCCGGCGA CAAGGTGATC
CTCAGCTACT GGGAGTCGCC GACCGCGAAG GACGGCAAGA TCGACGACGT CGCCACCTGG
AACCAGATGT GGGACACGGT CACCGCCGAA TACCGCACCA ACCCGCGCGT CTACTTCGAG
CCGATGAACG AGCCCTTCGG CTACACCCTC GACCAGTGGG TGCAGGTCTG CACCGGCTGG
CTCGCCCAGC ACGCCGACGT CCCGCGCGAT CACGTCGTCA TCTCCGGTAC CGGCTACAAC
GACAACGTCA CCGGCGTCGG CGCCACCCAG GCCTTGAGCG GCACGCTGCT CTCGCTGCAC
TTCTACGGCT ACTGGGCCAG CGCTACCACC GAGGCGGACT GGATCAGCAA CCTGCTTCCC
CGCATCGGCG GCTACGCCTC CCGCACCATC ATCGACGAAG CCGGCTCCCC GATGACCGTC
GGCCTGAACT ACGGCAACCA CAACGGAAAC GTCTTCACCG CCTACTTCGC CGCCGTCACC
GACATCGCGC GGGGGATGGG CATGGGGATG GTCTACTGGC CCGGGCTGCG AACCGGCGAC
TCCTACTCGA TAGAGAGCCT GGATGCCAAG GGATACCTGC AGAACAACAG CGCCAGCGGC
GTCGCGCAGC TGAAGTGGGG CTACGGCCTG GGCACCGTCC CGCCGGTCAA CGACCAGCCG
CCGGCGCCCG CCGGAACGCA GGTCACTGAG ACCGCCTCGG GCCGCTGCCT GGACGTCCCC
GGCTACTCCA CGACCAGCGG AACCCAGCTC GACCTGTGGG ACTGCAACGG CGGCGGGAAC
CAGTCGTGGG ACTACACCGC CACCCACCTG CTGACGGTCT ACAGCACCAA GTGCATGCAG
GCCGGCACGG GAACCGGAAC CGTGACCGCG GGCGCCGCAG TCGTCATCGA GGACTGCACC
GGTCTGCCGG CCCAGCAGTG GACCGTCGCG GCGAACGGCA CGATCGCCAG CGCCGCCGAC
GCCAGCCTGT GCCTGGACAC CACCGGCTCG GCGAGCGCCG ACGGCTCCAC GGCGGTCGTC
GCGGCGTGCT CGGGCTCGGC GAGTCAGAAC TGGAAGCTCG GATGA
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| Protein sequence | MRHPLVRLRR TTLVLAAGAL AVAATSGFAA YAAAASPAAA AAATQSAPSA AAPPSSFHGV
NWADPRDNYA SDAVVPSGLS VTDDYRTVYR TTQKMVDGFR TNLGANTLRL PINPASVGTA
WWKSYRATID AATASGDKVI LSYWESPTAK DGKIDDVATW NQMWDTVTAE YRTNPRVYFE
PMNEPFGYTL DQWVQVCTGW LAQHADVPRD HVVISGTGYN DNVTGVGATQ ALSGTLLSLH
FYGYWASATT EADWISNLLP RIGGYASRTI IDEAGSPMTV GLNYGNHNGN VFTAYFAAVT
DIARGMGMGM VYWPGLRTGD SYSIESLDAK GYLQNNSASG VAQLKWGYGL GTVPPVNDQP
PAPAGTQVTE TASGRCLDVP GYSTTSGTQL DLWDCNGGGN QSWDYTATHL LTVYSTKCMQ
AGTGTGTVTA GAAVVIEDCT GLPAQQWTVA ANGTIASAAD ASLCLDTTGS ASADGSTAVV
AACSGSASQN WKLG
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