| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4277 |
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| Symbol | |
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| ID | 8335631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4851507 |
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| End bp | 4852454 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957380 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003114982 |
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| Protein GI | 256393418 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.421015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTC CGCCGGAAAA CCTTGCAGAT CGTCCAGCGG CGACGGATTC GGACCTGCCG
CACGACCTGC TCTCGGAGCT GCTGCGCAGC GTGCGGCTGA CCGGCGAGCG GATCGTCGCG
TACACCCCGT CGCCGTTGTT CTCCGTCGAG TTCGCGGACC GAGGCAGCCT GCACATCGTC
GAAGAGGGCG AAGTCACGCT GCGGATCGAG GGCTCCCCGC ACGTCGAGCA CCTGTGCGCC
GGTGACTTCG TCCTGCTCCC GCGCGGCGAC GCGCACTCCA TCAGCGATGC CGGCCTCGGC
GGCAGCCCAG CCGGTGGCGA CGCCGACCGC CGCCCCGCGC GCTGGCTGTG CGGCACGTTC
ACCATCGGCG ACCCGCAAGC CAGCCACCTG CTCGGCAGCC TCCCGGCGGT GATCATCCTG
CGCGGCTCCG GCGGCCCGGA CCTGGAAGCC CTCGAAGGGC TCGAAGTCGC CCGCCGGATG
ATCGTGCTGG AGATGCAGTC GCCGTCGCAG GGCTCTGCGG TGATGGTCGC GCGCATCCTT
GACCTGATCT TCATCCAGAT CATGCGCACC TGGGCCGCCG GCGCGGACGT CGAGCCCAAC
TGGCTGGCCG GCGCCTTCGA CCCCCAGATC GGCCTGGCGC TGAGCGCCAT CCACCGCGAC
CCCGGCCGCG AATGGACGGT CGAGGAGCTG GCGCGCGCCT GCAACCTGTC CCGCTCGTCC
TTCGCGGCCC GCTTCGTCGA GCGCGTCGGC AAGCCGCCGG CCACCTACCT CGCGCACGTG
CGCCTGGACG CCGCCACCAC CCTGCTCCGC GACACCTTCC TGCCGGTCAC GCAGGTCGCC
GAGACCGTCG GCTACGCCTC AGAAGCCGCC TTCAGCCGCG CGTTCAAGAA CCGCTACGGC
ACGCCGCCGG CGCGCTGGCG GCGGGACATC CGGTACCCGC TGAGCTGA
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| Protein sequence | MTAPPENLAD RPAATDSDLP HDLLSELLRS VRLTGERIVA YTPSPLFSVE FADRGSLHIV
EEGEVTLRIE GSPHVEHLCA GDFVLLPRGD AHSISDAGLG GSPAGGDADR RPARWLCGTF
TIGDPQASHL LGSLPAVIIL RGSGGPDLEA LEGLEVARRM IVLEMQSPSQ GSAVMVARIL
DLIFIQIMRT WAAGADVEPN WLAGAFDPQI GLALSAIHRD PGREWTVEEL ARACNLSRSS
FAARFVERVG KPPATYLAHV RLDAATTLLR DTFLPVTQVA ETVGYASEAA FSRAFKNRYG
TPPARWRRDI RYPLS
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