Gene Caci_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4263 
Symbol 
ID8335617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4839017 
End bp4839757 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content72% 
IMG OID644957366 
Producthypothetical protein 
Protein accessionYP_003114968 
Protein GI256393404 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.579541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.123734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCTG AGGTCCACTC CCTGACCGGT GCCTACGTGT GCCATGCGCT GGAGCCCGCC 
GAACGCGAGG CGTTCGAGCG TCATCTGGCC GAGTGCCCGA CCTGTGTGCA GGAAGTCGCC
GAGCTGCAGG AGACCGCGGC GCTGCTGGCC TCCGCCGCCG CCGAGACCCC GCCGGCACGC
CTGAAGGCGG CGGTCGACGC GCGGATCGCG GTCACCCGGC AGATCCCGCC GATCATCGAC
CACACCCCGG CGCGGCAAGC CGCACCCCGG CCGCGGCGGC GCTGGTTCAC AGGGCTCGGC
TATGGTCTGG CCGCCGGGAT GGCGGTGGTC GTCGCGGTGC TGGGCGTCCG GCTGAACGAC
CAGCAGAATC AGATCGATCA GGCGCGCGAG CGCAGCACGA CGATCTCCGC GCTGCTCGCG
GCGCCCGACG CGCACAGCGA CAGCGTGACC GTGAGTACCG GCGGCAGCGG CAGGGTTCTG
GTTTCCCGGT CGCGCGACGA GGCCGCGATC ACGGTCAGCG GGCTCAGCCA GCTCTCGCCG
GGCAAGGTGT ATCAGCTGTG GATGATGGGT CCTTCGGGAG CCCGCTCCGG CGGGTTGGTG
CCGATCGGTT CCGAGGCCTT CGACTCGGTG CTGGCTCATG GGCTCGGCGA CGCGCAGACC
ATCGGGCTGA CGGTCGAGCC GACCGGTGGT TCGGCGCAGC CGACGACCAC GCCGGTGATG
CTGCTGCCGA TGCCCGCGTA G
 
Protein sequence
MDPEVHSLTG AYVCHALEPA EREAFERHLA ECPTCVQEVA ELQETAALLA SAAAETPPAR 
LKAAVDARIA VTRQIPPIID HTPARQAAPR PRRRWFTGLG YGLAAGMAVV VAVLGVRLND
QQNQIDQARE RSTTISALLA APDAHSDSVT VSTGGSGRVL VSRSRDEAAI TVSGLSQLSP
GKVYQLWMMG PSGARSGGLV PIGSEAFDSV LAHGLGDAQT IGLTVEPTGG SAQPTTTPVM
LLPMPA