Gene Caci_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4260 
Symbol 
ID8335614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4836726 
End bp4837766 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID644957363 
Producthypothetical protein 
Protein accessionYP_003114965 
Protein GI256393401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.20807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.305305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAT CCGAGTCCCC GCATCGCACG AAGATCTTCC TCGGCGCTGT CGCGGTCCTG 
CTCGCGATCG CCGTCGGCGC GGCGGTCGTG GCGTATCAGG GCCGGCCGAC GGCGCGCGCG
GGCGTCAAGG GCGCGGTGGT CCTGGACCAG TCCGACAGCC TGGACACCGG TTCGGGGTAC
TTGCTGTACA AGACGACGGT CGCCGGTCCC GACTTCGGCA CTCTCGCCGA ACGCAAGCTG
TCTGCGGACT CCAGCGGCGT GGTCGGCGTC CCGACGCTGT CCAACATCCA GTGCGACCGT
TCCTACACAG CGTCCGGAAT CCTGTTGTGC CTGCGCGCCG ACGAGAATCT GGTGCGCGTC
GCCTCGGTCG AGGTCTACGA CACATCCCTC AAGCTGATCA AGAAGGTCCA GGCGGCGGGC
ATCCCGAACC GCGCGCGGCT GTCCGCCGAC GGCCGCATGG CCGCGTGGAC GACCTTCGTC
GCCGGCGACG CGTACGTCGG ACCCGCGTTC TCCACGCGCA CCTCGATCCT GGACCTGAAG
ACCGGGGCGC TGACCGCTTC GCTGGAGAGC TTCGCGGTCA CGTTGCAGGG CAAGCCGTAT
CACGCGGTCG ACGAGAACGT GTGGGGCGTG ACCTTCGCCG ACGACAACAC CTTCTACGCG
ACCCTCGGCA CAGCCGGCCG CACCTGGCTG GTGCGCGGCG ACGTCGCGGC ACACACCCTG
ACCACGCTGA CCGACAACGT CGAATGCCCG TCGCTGTCCC CGGACGGCAC GCGCGTCGTG
TTCAAGAAGC GGGTGTCCAG CGACGCCTGG AAGATGTGGC ACTTGGAAGT GCTGAACCTG
GCGACCATGA CCGAGACGCC GCTGGCCGAG CAGCGCAGTG TCGATGACCA GGCGGCGTGG
CTGGACGACC ACACGGTGAT GTACGCGGTG CCGCAATCCG GGAGCTCCGG ATACGACGTG
TGGTCCACGC CGGCGGACGG TTCCGGCAAG CCCGTGCTGG TGGCACCGAA CGCTTTCTCG
CCTTCGGTGA CATCCGGGTA G
 
Protein sequence
MSISESPHRT KIFLGAVAVL LAIAVGAAVV AYQGRPTARA GVKGAVVLDQ SDSLDTGSGY 
LLYKTTVAGP DFGTLAERKL SADSSGVVGV PTLSNIQCDR SYTASGILLC LRADENLVRV
ASVEVYDTSL KLIKKVQAAG IPNRARLSAD GRMAAWTTFV AGDAYVGPAF STRTSILDLK
TGALTASLES FAVTLQGKPY HAVDENVWGV TFADDNTFYA TLGTAGRTWL VRGDVAAHTL
TTLTDNVECP SLSPDGTRVV FKKRVSSDAW KMWHLEVLNL ATMTETPLAE QRSVDDQAAW
LDDHTVMYAV PQSGSSGYDV WSTPADGSGK PVLVAPNAFS PSVTSG