Gene Caci_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4259 
Symbol 
ID8335613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4836103 
End bp4836576 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID644957362 
ProductMaoC domain protein dehydratase 
Protein accessionYP_003114964 
Protein GI256393400 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.358063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.378736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA CAGCCGAGTT GCCGGTGCGC CCGGGCTCGT TCGAGGACCT GCAGGAGCTG 
ATCGGCAAGG AGATTGGGCC GACCGAGTGG GACACGGTCT CCCAGGAGCG CATCGACGCC
TTCGCCGCCG TGACCGGTGA CAACCAGTGG ATCCACATCG ACCCGGAGCG CGCCGCCGCC
AGTCCGCTGG GGACCACCAT CGCGCACGGG CTGTTCACAC TCGCGCTGGG ACCGGCGTTC
TCCTACCGGC TGCTGTCCTT CGCGGGCTTC GCGCATGGTC TGAACTACGG CTACGACAAG
ATCCGCTTCC CCGCGCCGCT GCCGTCGGGC ACGCGCGTGC GCATGCGGCT GACGCTGCAG
GGCGCGGACC GGGTTCCCGG CGGGATCCAG GTGCGGACTG TGCAGGTCAT CGAGGCTGAG
GGGATCGAGA AGCCGGTCAT GGTCGCCGAG GCGCTGGCGC GGATCGTCGA GTAG
 
Protein sequence
MTDTAELPVR PGSFEDLQEL IGKEIGPTEW DTVSQERIDA FAAVTGDNQW IHIDPERAAA 
SPLGTTIAHG LFTLALGPAF SYRLLSFAGF AHGLNYGYDK IRFPAPLPSG TRVRMRLTLQ
GADRVPGGIQ VRTVQVIEAE GIEKPVMVAE ALARIVE