| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4258 |
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| Symbol | |
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| ID | 8335612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4834398 |
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| End bp | 4836041 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957361 |
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| Product | putative transcriptional regulator, PucR family |
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| Protein accession | YP_003114963 |
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| Protein GI | 256393399 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.484226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.267228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTACAC CTGCCGATGC CACCTCCCGC GCCGCGCTCG GGCGGGTCTT GGACTACCTC
GGCACCACAT TGCTCGACCT CGCCGCCGGT GATCCGGGGT GTGCACCGGA GGTCGGGGGT
GTCGTCATCC ATGATCCGCT CGATGAGCCC GCGCTGCCGC CGGGTGCGTT GGTGCTCGGC
GTCGGCGTGC GCGGGACGGA GCAGATTTGC GAGCTGCTGA AGCGGATCGC GGCTGATGGC
GGCGTCGGGT TGATCGTGCG TGCCCCGGCT GAGGTCGATG AGCAGGTGCG CAGGACCGTC
TCTGAGACCG GCACTGTGCT GTTGGGTCTG GTCCGTGGTG CGTCCTGGAC CCAGCTGACC
TCGCTGCTGC GCACTCTGCT GGCTGAGGGC GAGGTCGTAG CCACCGAGGC GGAGACGATC
GGCGGTGTTC CGGCCGGGGA TCTGTTCGCG TTGGCCAATG CGATCAGTGC GTTGCTGGAT
GCGCCGATCA CGATCGAGGA CCGGAGTTCG CGGGTGCTGG CGTTCTCTGA TCGGCAGGAT
GAGGCGGACC AGTCGCGGGT GGAGACGATT CTGGGGCGTC AGGTTCCCGC CGACTACGCG
CGGTTGCTGG AGCAGGGTGG TTACTTTCGG GAGTTGTACC GGCACGAGCG GCCGGTGGTG
ATCCGGGCTG AGGCGTTCGG GTTGCCGACG GTGACCAAGG CGCGGCAGGC GATCGCGGTG
CGCGCGGGGG ATGAGATCCT GGGCTCGATC TGGGCCGCCG TCGCCGAACC GCTGGCGCCG
GCGCGTGAGC AGGCGTTCGT CGAGGCGGCG AAGCTGGTCG CGCTGCATCT GCTGCGGGTG
CGTGCCGGCG CCGACGTCGA GCGGCGGTTG CGGGCCGAAC TCGTCGCCAT CGTGCTGGAA
GGCGGTCCGG GTGCGCCGGA TGCCGCGGCA CGGCTCGGGT TGGCGGGGCG CGCCTGCGTG
GTCGCGGCGG TCGCGGCTGC CGCTGCGCCG GAGGGTTCCC ACGCCGAGGG CGCGCGCGAG
CTCGCCCGGT TCGAGACGGC GCGGCAGCAA GCGCTGGACA CCCTCGCCGT CCATCTCTCG
GCGGTGCAGC ACGGCTCGGT CGCGGCGCTG CTCGGCGGGG TCGTCTACGC GGTCCTGCCG
GTCGACACCG CCGACGAGCA GGCAGCCGAA CAGCGGGTCA GTACCGTGTT GAAGGAATAT
CTGGAGCGCA CCGGCGCGGG CGATCTCGTC GGAATCGGGC GTATCGCTCG CGATCTGCAC
GCTGTGCCGA GGTCGCGTCA GGACGCCGAC CGCGTGCTGC GCGTGCTGCG GCGTCGGCGA
TCGCGGCGCA CGCTGGCAAG CCTTTCGGAG GTCTACGCCG AGGCGCTGCT GATCGACGTG
GCAGCCGCCG ACGGCCACCG TCCGTCAGGT CCGGTCGCCG GGCTCGCGGC ATACGATCGC
GAGCACAACA GCAGCCTGGT GGCGACGCTG ACCGCGTGGC TGGACGCCTT CGGCGACGTC
AACGCGGCGG CTGAGGCCGT TCACATCCAC CCGAACACCT TCCGGTATCG GCTGCACCGC
ATCGCTGAGA TCGGCGATGT CGATCTCAGC GACAGCGAGT CGCGGTTCGC CTTGATGCTG
CAGCTGAGGT TGCTGGATTC GTAA
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| Protein sequence | MRTPADATSR AALGRVLDYL GTTLLDLAAG DPGCAPEVGG VVIHDPLDEP ALPPGALVLG
VGVRGTEQIC ELLKRIAADG GVGLIVRAPA EVDEQVRRTV SETGTVLLGL VRGASWTQLT
SLLRTLLAEG EVVATEAETI GGVPAGDLFA LANAISALLD APITIEDRSS RVLAFSDRQD
EADQSRVETI LGRQVPADYA RLLEQGGYFR ELYRHERPVV IRAEAFGLPT VTKARQAIAV
RAGDEILGSI WAAVAEPLAP AREQAFVEAA KLVALHLLRV RAGADVERRL RAELVAIVLE
GGPGAPDAAA RLGLAGRACV VAAVAAAAAP EGSHAEGARE LARFETARQQ ALDTLAVHLS
AVQHGSVAAL LGGVVYAVLP VDTADEQAAE QRVSTVLKEY LERTGAGDLV GIGRIARDLH
AVPRSRQDAD RVLRVLRRRR SRRTLASLSE VYAEALLIDV AAADGHRPSG PVAGLAAYDR
EHNSSLVATL TAWLDAFGDV NAAAEAVHIH PNTFRYRLHR IAEIGDVDLS DSESRFALML
QLRLLDS
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