| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4256 |
|---|
| Symbol | |
|---|
| ID | 8335610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4831616 |
|---|
| End bp | 4832722 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957359 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003114961 |
|---|
| Protein GI | 256393397 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.165898 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCT CCGGCGTCGA ACTGCGCCGC CTGACCATGC CGCTGCGCAG CCCGTTCGAG
ACGTCCTTCG GCGTCGCGAC CGAACGCGAC ATCCTGCTGG TCCGCGTCGC CACCGAGGAG
GCGGACGGCT GGGGCGAATG CGTGGCGATG AACGATCCGC TCTACTCCTC GGAGTACACC
CAGGGCGCCC ACGACGTCAT CACCCGCTAC TTCCTGCCCA AGCTCGCCGC CGCGCCGCGC
GTCACCGCCG CCCTCGTCGC GCAGATCCTG GCGCCGTTCA AAGGCCACCC GATCGCCAAG
GCTGCGGTGG AATCCGCAGT CCTGGACGCC GAATTGCGCG CTGTCGGTAC CTCCTTCGGC
GACCACCTCG GCGCCGTGCG CACCTCGGTA CCGGTCGGCG TCTCGGTCGG CATCATGCCG
AGCGTCGCAG AACTCATCGA TACTGTCGGC GGCTACCTGG ACCAGGGCTA TCGGCGCGTC
AAGCTGAAGA TCAAGCCCGG ATGGGACGTC GAGCCGGTCC GCGCGGTCCG CGAGCGCTTC
GGCGATGAGC TGCTGCTCCA GGTCGACGCC AACACCGCCT ACACCCTCGG GGACGCCCAG
CGCCTGGCCG CCCTGGACCC CTTCGACCTG CTGCTCATCG AACAGCCGCT GCCGGAGGAC
GACCTGCGCG GGCACGCGGC GCTGTCCCGG CTGGTGAAGA CCCCGATCTG TCTGGACGAG
TCCATCGTCT CGGCGCGCTC GGCGGCGGAC GCGATCGCGC TGGACGCGTG CCGGATCGTG
AACATCAAGC CGGCGCGCGT CGGCGGCTAC CTGGAAGCCC GCCGGGTGCA CGACGTGTGC
GCCGCGCACG GCGTGCCGGT CTGGTGCGGC GGCATGTTGG AGACCGGCAT CGGCCGTGCC
GCGAACGTCG CCCTGGCGGC GCTGCCGAAC TTCACGCTCC CCGGCGACAT CAGCGCCTCG
GAGCGCTACT TCACCCGCGA CATCACCGAA CCCTTCGTCC TGCGCGACGG CGGACTGGAC
GTGCCGCAGG GTCCCGGCCT CGGGGTCACG CCGGATCCTG CGCTGCTCGA GGAGTTCACC
ACCGCCAAGC ACTGGTTCGG CTTCTAA
|
|---|
| Protein sequence | MKISGVELRR LTMPLRSPFE TSFGVATERD ILLVRVATEE ADGWGECVAM NDPLYSSEYT
QGAHDVITRY FLPKLAAAPR VTAALVAQIL APFKGHPIAK AAVESAVLDA ELRAVGTSFG
DHLGAVRTSV PVGVSVGIMP SVAELIDTVG GYLDQGYRRV KLKIKPGWDV EPVRAVRERF
GDELLLQVDA NTAYTLGDAQ RLAALDPFDL LLIEQPLPED DLRGHAALSR LVKTPICLDE
SIVSARSAAD AIALDACRIV NIKPARVGGY LEARRVHDVC AAHGVPVWCG GMLETGIGRA
ANVALAALPN FTLPGDISAS ERYFTRDITE PFVLRDGGLD VPQGPGLGVT PDPALLEEFT
TAKHWFGF
|
|---|
| |