Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4230 |
Symbol | |
ID | 8335584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4798827 |
End bp | 4799588 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957333 |
Product | hypothetical protein |
Protein accession | YP_003114935 |
Protein GI | 256393371 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.101232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.122542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCGAA TCCCCGTAGT CCTCATCCAC GGTGTGGGGG TGGACATGTC GTCCTGGGAG GGCTGGACGG AACGGTTCGC CGCGCACGGC TACGACGTGC ACGTCCCCGC GGAACCATCT GGCGTGTTCG GTCTGGAGGA GCTCACCGCG CACTACGAGA AGGCGGTCCG CTCGCAGGAC CGGCCGCCGG TGCTTATCGG GCACTCGGTC GGAGGGCTCA TCGCCCGGCA GCTTCTGGAC GCGGGGTTGG GACGAGCCGC GGTCGCGATC GCGCCGCTGC CGCTGCCGCT GCCGCTGGCA CCACCGTCCA GCGACAAGGC CGGGACGCAG TCCGAGGACT ACACACAGCT CCTGCAACCC TTGTTCCGCC ACACAATCGC GAACGCGGTC GGTGAGGAAG AGGCCGCGCA GCTGTATGCC CGCTACGTCG TCCCGGCTCC GCGCCGGCTG CTTGTCGACC TCGGGCTGGA CGACACCATG CGCAGCGGCG GCGACGTGGC GGCCGGCGAG GGCGTTGTCG TCGACGCGGC GACGCGGGGA CCGCTGCTGC TCATCTCCGG CCAGGAAGAC CGCATGGTCG CCGACGCCGT CACGCGCGCC ACCTACAAGC TCTACGGCGA CTCCACGGCC GTCACCGACC TGAAGCAGTT CGCTGACAGA GGGCACTCGC TGGTCTTCGA CAGCGGCTGG CCCGCCGTCG CCGACTACGT GCTGGCGTGG CTGGCGGCCA ACGGGATCAC GAGCCCGGCC GAGCAGGGCT GA
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Protein sequence | MNRIPVVLIH GVGVDMSSWE GWTERFAAHG YDVHVPAEPS GVFGLEELTA HYEKAVRSQD RPPVLIGHSV GGLIARQLLD AGLGRAAVAI APLPLPLPLA PPSSDKAGTQ SEDYTQLLQP LFRHTIANAV GEEEAAQLYA RYVVPAPRRL LVDLGLDDTM RSGGDVAAGE GVVVDAATRG PLLLISGQED RMVADAVTRA TYKLYGDSTA VTDLKQFADR GHSLVFDSGW PAVADYVLAW LAANGITSPA EQG
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