Gene Caci_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4230 
Symbol 
ID8335584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4798827 
End bp4799588 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID644957333 
Producthypothetical protein 
Protein accessionYP_003114935 
Protein GI256393371 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.122542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCGAA TCCCCGTAGT CCTCATCCAC GGTGTGGGGG TGGACATGTC GTCCTGGGAG 
GGCTGGACGG AACGGTTCGC CGCGCACGGC TACGACGTGC ACGTCCCCGC GGAACCATCT
GGCGTGTTCG GTCTGGAGGA GCTCACCGCG CACTACGAGA AGGCGGTCCG CTCGCAGGAC
CGGCCGCCGG TGCTTATCGG GCACTCGGTC GGAGGGCTCA TCGCCCGGCA GCTTCTGGAC
GCGGGGTTGG GACGAGCCGC GGTCGCGATC GCGCCGCTGC CGCTGCCGCT GCCGCTGGCA
CCACCGTCCA GCGACAAGGC CGGGACGCAG TCCGAGGACT ACACACAGCT CCTGCAACCC
TTGTTCCGCC ACACAATCGC GAACGCGGTC GGTGAGGAAG AGGCCGCGCA GCTGTATGCC
CGCTACGTCG TCCCGGCTCC GCGCCGGCTG CTTGTCGACC TCGGGCTGGA CGACACCATG
CGCAGCGGCG GCGACGTGGC GGCCGGCGAG GGCGTTGTCG TCGACGCGGC GACGCGGGGA
CCGCTGCTGC TCATCTCCGG CCAGGAAGAC CGCATGGTCG CCGACGCCGT CACGCGCGCC
ACCTACAAGC TCTACGGCGA CTCCACGGCC GTCACCGACC TGAAGCAGTT CGCTGACAGA
GGGCACTCGC TGGTCTTCGA CAGCGGCTGG CCCGCCGTCG CCGACTACGT GCTGGCGTGG
CTGGCGGCCA ACGGGATCAC GAGCCCGGCC GAGCAGGGCT GA
 
Protein sequence
MNRIPVVLIH GVGVDMSSWE GWTERFAAHG YDVHVPAEPS GVFGLEELTA HYEKAVRSQD 
RPPVLIGHSV GGLIARQLLD AGLGRAAVAI APLPLPLPLA PPSSDKAGTQ SEDYTQLLQP
LFRHTIANAV GEEEAAQLYA RYVVPAPRRL LVDLGLDDTM RSGGDVAAGE GVVVDAATRG
PLLLISGQED RMVADAVTRA TYKLYGDSTA VTDLKQFADR GHSLVFDSGW PAVADYVLAW
LAANGITSPA EQG