Gene Caci_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4227 
Symbol 
ID8335581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4794642 
End bp4794974 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content69% 
IMG OID644957330 
ProductYCII-related protein 
Protein accessionYP_003114932 
Protein GI256393368 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0725817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTACC TGATGCTGGT GTGCGTGGAC CCCGACAAGC CCGAGGAGGA GATCGCCGGC 
GCTCCCGACA TCGACGTGTG GGTCAAGGAC AACGACGAGC AGGGCATCCG GCTCATGGGC
GACCGGGTGC GGCCCGGCAG CGACGCCACC TGCGTGCGCG TCCGCGACGG CGAGGTCCTG
CTCACCGACG GTCCCTACGT CGAGACCAAG GACCTGATCG CCGGCTTCGA CGTGCTGGAG
TGCGCCGATC TGGACGAGGC CGTCGAGGTC GCCTCGCGCC ACCCGATGGC CTGGCACGGC
GTCATCGAGC TGCGGCCCTT CTGGGTCGAC TGA
 
Protein sequence
MRYLMLVCVD PDKPEEEIAG APDIDVWVKD NDEQGIRLMG DRVRPGSDAT CVRVRDGEVL 
LTDGPYVETK DLIAGFDVLE CADLDEAVEV ASRHPMAWHG VIELRPFWVD