| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4225 |
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| Symbol | |
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| ID | 8335579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4791619 |
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| End bp | 4793274 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957328 |
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| Product | Carbohydrate-binding CenC domain protein |
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| Protein accession | YP_003114930 |
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| Protein GI | 256393366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3469] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0637754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGGA ATCTCAGTTC TCGCCGACGA CAACTTCTCG CCTCCGCCGG GGCGGCGGTC
GGCGCGCTCG CGCTCGCGGG AGCAGCCGCG GGCCTCGCGA CGAACGCGAC GGCCGCCACG
GGCGCGCCCG CCGCGGCGCC GGCGGCGTCC GGCAACCTGC TGACCAACCC CGGGTTCGAA
ACCGGGGACT TGTCCGGTTG GACGTGTGAC GCCGGTACAG GAGCCGTCGT CGCCTCGCCC
GTGCGCTCCG GAACCCATTC GCTGGCCGGC ACGCCGTCGG GGTCGGCCGA CGCGCAGTGC
ACGCAGACCG TCTCGGTGCA GCCGAACACG GCGTACACGT TCTCAGGGTA CGTCGAAGGG
TCCTACGTCT ACATCGGCGT GACCGGCGGC ACCTCGACGT GGACGCCGTC GGCGACCAGC
TGGCAGCAGC TGTCGGTGGC GTTCACGACC ACCGCGTCGC AGACCTCTGT CCAGGTCTAC
GTCCACGGCT GGTACGGGCA GCCGGTGTAC CACGCCGACG ACCTGGCGCT GACCGGCCCG
GCCGGACCGC CGCCGACGAC TCCGCCGACG ACTCCGACCA CACCGCCCAC GACGCCGTCC
ACGACGCCGA CGACCGTGCC GACGTCGAGC ACGCCCACGA CGCCGACCAG CTCCACGCCG
AGCACCCCGC CGAGCAGCTC CTCCTCCGCG CCGGGCGGCA CGACCTGCCC GGTCAAGTCG
CGCCCGGCGG GCAAGGTGAT CCAGGGCTAC TGGGAGAACT GGGACGGCGC GCTCAACGGC
GTGCACCCCG GGCTCGGCTG GATCCCGATC AACGACCCGC GCATCCAGCA GCACGGATAC
AACGTGATCA ACGCCGCGTT CCCGGTCATC CTGTCCGACG GCACCGCCGA ATGGCAGGAC
GGCATGGACA CCAACGTCAA GGTCGACACC CCGGCCGACT ACTGCGCGGC GAAGGCCTCC
GGCGCGACGA TCCTGATGTC GATCGGCGGC GCGGCCGCGG GCATCGACCT CAACTCCAGC
ACGGTCGCCG ACAAGTTCGT CGCCACCATC GTGCCGATCC TGAAGGCGTA CAACTTCGAC
GGCATCGACA TCGACATCGA GACCGGCCTG ACCGGCAGTG GCAGCATCAA CACCCTGTCG
ACCTCGCAGG CCAACCTCGA GCGCATCATC GACGGCATCC TCGCCCAGAT GCCCTCGAAC
TTCGGCCTGA CCATGGCGCC GGAGACCGCC TACGTGACCG GCGGCAGCGT CACGTACGGC
TCGATCTGGG GCTCGTACCT CCCGATCATC AAGAAGTACA TGGACAACGG CCGCCTGTGG
TGGCTGAACA TGCAGTACTA CAACGGCAGC ATGTACGGCT GCTCCGGCGA CTCCTACCAG
GCCGCGACAG TCCAGGGCTT CCAGGTCCAG ACCAACTGCC TGAACAGCGG CCTGACCATC
CAGGGCACCA CCATCAAGGT CCCCTACGAC CACCAGGTCC CAGGCCTGCC CGCCCAACCC
GGCGCCGGCG GCGGCTACAT GACCCCGTCC CTGGTCTCCC AGGCATGGAG CAGCGTCGGC
GGCCAAGTCA AGGGCCTGAT GACCTGGTCG GTCAACTGGG ACGGCTCCCT GGGCTGGACC
TTCGGGAACA ACGTGAAGGG GTTGGAGGGA CGCTGA
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| Protein sequence | MLRNLSSRRR QLLASAGAAV GALALAGAAA GLATNATAAT GAPAAAPAAS GNLLTNPGFE
TGDLSGWTCD AGTGAVVASP VRSGTHSLAG TPSGSADAQC TQTVSVQPNT AYTFSGYVEG
SYVYIGVTGG TSTWTPSATS WQQLSVAFTT TASQTSVQVY VHGWYGQPVY HADDLALTGP
AGPPPTTPPT TPTTPPTTPS TTPTTVPTSS TPTTPTSSTP STPPSSSSSA PGGTTCPVKS
RPAGKVIQGY WENWDGALNG VHPGLGWIPI NDPRIQQHGY NVINAAFPVI LSDGTAEWQD
GMDTNVKVDT PADYCAAKAS GATILMSIGG AAAGIDLNSS TVADKFVATI VPILKAYNFD
GIDIDIETGL TGSGSINTLS TSQANLERII DGILAQMPSN FGLTMAPETA YVTGGSVTYG
SIWGSYLPII KKYMDNGRLW WLNMQYYNGS MYGCSGDSYQ AATVQGFQVQ TNCLNSGLTI
QGTTIKVPYD HQVPGLPAQP GAGGGYMTPS LVSQAWSSVG GQVKGLMTWS VNWDGSLGWT
FGNNVKGLEG R
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