| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4220 |
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| Symbol | |
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| ID | 8335574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4785450 |
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| End bp | 4786373 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957323 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003114925 |
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| Protein GI | 256393361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0372961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.870166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG CCACGACCAC CCCGACAGCC ACTCCTTCCA GCCCACCGAA ACGACCCGCG
CTGCGTCACC GCCTCGCCGA ACGCGGCGTG GACCGCACGC TGCTCCTGGT GCTGCCCGGA
GCACTCGCGC TGCTCGCACT GTTCTGCTAC CCGTTCCTGT ACGGCTTGCA GCTCTCGTTC
CAACCAACGC ACGGCGGCGT CCTGGGCGAC TACCAGAAGT TCTTCAGCGA CCCGTTCTCC
CGCAAGTCGA TCTGGGCGAC GTTCTCGCTG GCGATCCCGG CCTCGCTGAT CAACGTCGGC
GCCTCCATCC CGATCTCCTA CCGGATGCGG CGCGACTTCC GCGGCAAGCG GATCATGCTC
GCGGTGCTGG TCGTGCCGAT CACCCTCGGC ACGGTGCTGA CCGCCGAGGG CATCCTGGAG
TTCTTCGGCC CGGCCGGCTG GTTCAACAGG ACCCTGCATC TGCTGGGACT GGCCGCCTCG
CCGATGAAGC TGACGATGAA CTACACCGGC GTGCTGCTCT CGCTGATCAT CAGCGGCTTC
CCGTTCGCCT ACCTGCTGAC GCACTCCTAC CTCTCCGGAA TCCACCCCAG TCTGGAGAAG
GCCGCCGCCA CCCTCGGTGC CGGCTGGTGG CAGCGCTTCC GCCACATCAC CTTGCCGCTG
CTGCTCCCCG GCCTGCTGAC CACCTTCAGC CTGACCTTCG TCATGGCCTT CGCCGTCTTC
CCCTCCGCCC TCATGGTCGG CGACCCCGAC GGCCACACCC ACGTCATCTC CATCGAGGCC
TACGAGGCCG CGCTGGAACG CTTCGACTAC GCGCAGGGCT GCGCCGACGC CATGATCATG
ACGGTCCTGA TGCTGGCGGT GATCGGCGCG CTGGCCGCGG CCCGGTCCCG CATGTACCGG
GGCGCGACGG GAGGTAAGGG ATGA
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| Protein sequence | MTAATTTPTA TPSSPPKRPA LRHRLAERGV DRTLLLVLPG ALALLALFCY PFLYGLQLSF
QPTHGGVLGD YQKFFSDPFS RKSIWATFSL AIPASLINVG ASIPISYRMR RDFRGKRIML
AVLVVPITLG TVLTAEGILE FFGPAGWFNR TLHLLGLAAS PMKLTMNYTG VLLSLIISGF
PFAYLLTHSY LSGIHPSLEK AAATLGAGWW QRFRHITLPL LLPGLLTTFS LTFVMAFAVF
PSALMVGDPD GHTHVISIEA YEAALERFDY AQGCADAMIM TVLMLAVIGA LAAARSRMYR
GATGGKG
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