Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4213 |
Symbol | |
ID | 8335567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4775338 |
End bp | 4776852 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957316 |
Product | beta-lactamase |
Protein accession | YP_003114918 |
Protein GI | 256393354 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.780595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCT CGACGACCAC GATCTGCACA GCTGAGGACA TTTTTCGGCT CGGTGCAGGG AAGGCCCAGG ACTGGACCTG CCCAGCTGAC CGCCGAACCG GAGATCTGAT GACCGCTCTG CCCCGCTCCG CGCCCTCGAC GCAGGACACT GACGCCCACG GCATCGTCGC CTTCCTCGAC GCGATCGACG GTCTGGACGG GACCGAGCCG CACAGCGTCA TGCTGCTGCG GCACGGCCAG GTGATCGCGG AGGGCTGGTG GACGCCGTAT CGCCGGGACG AGGTGAAGCA GCTCTACTCG CTGAGCAAGA GCTTCACCTC CACCGCGGCC GGATTCGCTT GGGCGGAAAA GCTTTTGGAC CTCGACGCCC CGGTCGTTTC CTACTTCCCG GAGCTGGACG CGGAGGTCAC CGATCCGCGC AGCCGGTCGA TCCTGGTGCG GCATGTCGCG ACCATGTCCG CCGGGCACAC CAGCGAGCAG TGGAACCGCG CGGTGGAGAC GGACTACGAC GATCCTGTGC GCGGCTTCCT GCTCGACCCG CCGGACGGCA CGCCGGGCGT CACCTTCGCC TACAGCCAGT CGACCACGTA CGTGCTCGGC GCGATCATCC AGCGCGTCAC CGGCAGCTCG CTGCTGGAGT ACCTACGGCC GCGCCTGTTC GATCCGCTGG GGATCGGCGA GGCGTTCTGG CTGCAACACC CGCCGGGACG CGACATCGGC TTCGCCGGAC TGCACGTCAC CACCGACGCG ATCGCGCGCC TCGGTCAGCT GTACCTGCGC GGCGGGGTGT GGGAGGGGCA TCAGTTGCTG GCGCCGGAGT GGGTCGCCGA AGCCACGCGC GCTCAGGTCG ACAACAGCAA CTGGGGCGGA CCGACCTCCG ATTGGGCACA GGGGTACGGC TTCCAGTTCT GGATCGCGCG CCACGGCTAT CGCGGCGACG GAGCCTATGG GCAGTTCTGT GTGATCCTGC CCGAGCACGA TGTGGTCCTG GCTTGGACCG GCGAGAGCGA CGACATGCAA GCGGTGCTCG ACGCGGCGTG GACGCACCTG CTGCCGGCTT TCGCCCGCGA GGGCTCGGCG GCTGCGGATG CGGCGCTGGC ACAACGGTTG ACCGGGCTTG AGCTGCCGTT CCCGGACGTT GACGAGGTCG CCGACGGCGA GTTCACCATT GCCGTCTCGG CTTTGCGAAA GCTCGAGCGG ATCAGCCTCA CGGCGAGGGA ACTGACGCTG CACGAGCAGG ACGGCGTCAG CACGAGACTG CCTCTGATCA CCGGCGCCTG GCCGCCGCCG ACGGGGAACC TGACGGCGCG TGCGACGCGG ACCGATGCGG ATACGGTGAC GGTGCACCTG CAGTTCACGC AGGCGCCGCA CAAGCTCGTC ATCACGGGCG ATCTGCGCAC CAACACCTTC ACAGCCGTGT GGCGCACGGT CCCGCTGATG AGCCGTTCGA TCACCGCGCT GTCGGCGATC GCCGATCCTG CGGGGCGGGA CAGTTTGTGG CCGCGCAAAA GCTGA
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Protein sequence | MPSSTTTICT AEDIFRLGAG KAQDWTCPAD RRTGDLMTAL PRSAPSTQDT DAHGIVAFLD AIDGLDGTEP HSVMLLRHGQ VIAEGWWTPY RRDEVKQLYS LSKSFTSTAA GFAWAEKLLD LDAPVVSYFP ELDAEVTDPR SRSILVRHVA TMSAGHTSEQ WNRAVETDYD DPVRGFLLDP PDGTPGVTFA YSQSTTYVLG AIIQRVTGSS LLEYLRPRLF DPLGIGEAFW LQHPPGRDIG FAGLHVTTDA IARLGQLYLR GGVWEGHQLL APEWVAEATR AQVDNSNWGG PTSDWAQGYG FQFWIARHGY RGDGAYGQFC VILPEHDVVL AWTGESDDMQ AVLDAAWTHL LPAFAREGSA AADAALAQRL TGLELPFPDV DEVADGEFTI AVSALRKLER ISLTARELTL HEQDGVSTRL PLITGAWPPP TGNLTARATR TDADTVTVHL QFTQAPHKLV ITGDLRTNTF TAVWRTVPLM SRSITALSAI ADPAGRDSLW PRKS
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