Gene Caci_4213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4213 
Symbol 
ID8335567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4775338 
End bp4776852 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content68% 
IMG OID644957316 
Productbeta-lactamase 
Protein accessionYP_003114918 
Protein GI256393354 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.780595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCT CGACGACCAC GATCTGCACA GCTGAGGACA TTTTTCGGCT CGGTGCAGGG 
AAGGCCCAGG ACTGGACCTG CCCAGCTGAC CGCCGAACCG GAGATCTGAT GACCGCTCTG
CCCCGCTCCG CGCCCTCGAC GCAGGACACT GACGCCCACG GCATCGTCGC CTTCCTCGAC
GCGATCGACG GTCTGGACGG GACCGAGCCG CACAGCGTCA TGCTGCTGCG GCACGGCCAG
GTGATCGCGG AGGGCTGGTG GACGCCGTAT CGCCGGGACG AGGTGAAGCA GCTCTACTCG
CTGAGCAAGA GCTTCACCTC CACCGCGGCC GGATTCGCTT GGGCGGAAAA GCTTTTGGAC
CTCGACGCCC CGGTCGTTTC CTACTTCCCG GAGCTGGACG CGGAGGTCAC CGATCCGCGC
AGCCGGTCGA TCCTGGTGCG GCATGTCGCG ACCATGTCCG CCGGGCACAC CAGCGAGCAG
TGGAACCGCG CGGTGGAGAC GGACTACGAC GATCCTGTGC GCGGCTTCCT GCTCGACCCG
CCGGACGGCA CGCCGGGCGT CACCTTCGCC TACAGCCAGT CGACCACGTA CGTGCTCGGC
GCGATCATCC AGCGCGTCAC CGGCAGCTCG CTGCTGGAGT ACCTACGGCC GCGCCTGTTC
GATCCGCTGG GGATCGGCGA GGCGTTCTGG CTGCAACACC CGCCGGGACG CGACATCGGC
TTCGCCGGAC TGCACGTCAC CACCGACGCG ATCGCGCGCC TCGGTCAGCT GTACCTGCGC
GGCGGGGTGT GGGAGGGGCA TCAGTTGCTG GCGCCGGAGT GGGTCGCCGA AGCCACGCGC
GCTCAGGTCG ACAACAGCAA CTGGGGCGGA CCGACCTCCG ATTGGGCACA GGGGTACGGC
TTCCAGTTCT GGATCGCGCG CCACGGCTAT CGCGGCGACG GAGCCTATGG GCAGTTCTGT
GTGATCCTGC CCGAGCACGA TGTGGTCCTG GCTTGGACCG GCGAGAGCGA CGACATGCAA
GCGGTGCTCG ACGCGGCGTG GACGCACCTG CTGCCGGCTT TCGCCCGCGA GGGCTCGGCG
GCTGCGGATG CGGCGCTGGC ACAACGGTTG ACCGGGCTTG AGCTGCCGTT CCCGGACGTT
GACGAGGTCG CCGACGGCGA GTTCACCATT GCCGTCTCGG CTTTGCGAAA GCTCGAGCGG
ATCAGCCTCA CGGCGAGGGA ACTGACGCTG CACGAGCAGG ACGGCGTCAG CACGAGACTG
CCTCTGATCA CCGGCGCCTG GCCGCCGCCG ACGGGGAACC TGACGGCGCG TGCGACGCGG
ACCGATGCGG ATACGGTGAC GGTGCACCTG CAGTTCACGC AGGCGCCGCA CAAGCTCGTC
ATCACGGGCG ATCTGCGCAC CAACACCTTC ACAGCCGTGT GGCGCACGGT CCCGCTGATG
AGCCGTTCGA TCACCGCGCT GTCGGCGATC GCCGATCCTG CGGGGCGGGA CAGTTTGTGG
CCGCGCAAAA GCTGA
 
Protein sequence
MPSSTTTICT AEDIFRLGAG KAQDWTCPAD RRTGDLMTAL PRSAPSTQDT DAHGIVAFLD 
AIDGLDGTEP HSVMLLRHGQ VIAEGWWTPY RRDEVKQLYS LSKSFTSTAA GFAWAEKLLD
LDAPVVSYFP ELDAEVTDPR SRSILVRHVA TMSAGHTSEQ WNRAVETDYD DPVRGFLLDP
PDGTPGVTFA YSQSTTYVLG AIIQRVTGSS LLEYLRPRLF DPLGIGEAFW LQHPPGRDIG
FAGLHVTTDA IARLGQLYLR GGVWEGHQLL APEWVAEATR AQVDNSNWGG PTSDWAQGYG
FQFWIARHGY RGDGAYGQFC VILPEHDVVL AWTGESDDMQ AVLDAAWTHL LPAFAREGSA
AADAALAQRL TGLELPFPDV DEVADGEFTI AVSALRKLER ISLTARELTL HEQDGVSTRL
PLITGAWPPP TGNLTARATR TDADTVTVHL QFTQAPHKLV ITGDLRTNTF TAVWRTVPLM
SRSITALSAI ADPAGRDSLW PRKS