Gene Caci_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4212 
Symbol 
ID8335566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4774464 
End bp4775372 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID644957315 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003114917 
Protein GI256393353 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.429799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT CTGCCCGCGA TGGCCGGGCC GGCATCGATG CTTCCCTGGT CAAGCGCCTG 
ATCTCGGCGC AGTTCCCGCA CTGGTCGCAG CTGCCGGTGA CCCCGGTGGA GTTCGACGGC
TGGGACAACC GGACCTATCG GCTCGGCAGC GACATGACCG TGCGCCTGCC GACCGCCGCC
GGCTACGTCG CGGGCGTCGC GAAGGAGAAC GAGTGGCTGC CGCGGCTCGC CCCGCACCTG
CCGCTGCCGA TCCCGCAGGT GCTCGGCGCA GGTGTGCCGG GGGAGGGCTA CCCGCATCCG
TGGTCGATCC GGAACTGGCT GCCGGGCAGC ACGCTGGAGT TCCAGGACCT GGCCGATCCC
GTTGAGTTTG CTACCGATCT GGCCGCGTTC CTCCGTGCAC TGCAGAACTG CGACACCACC
GGCGGCCCGC TCGCAGGCGC CCACAGCTTC TACCGAGGCA CGTCGCCTGC CTACTACGAC
GCCGAAACCC GCGACTGTCT GGCTGATCTC GAGGGACGCA TCGACGTCGG CCGCGCCACC
GAGGTCTGGG AAGCCGCCGT GAAGTCCGCA TGGCACGGCG CGCCGGTCTG GTTCCACGGC
GACATTGCCA CCGGCAACCT GCTCGTCCAG AACGGACGGC TGTCCGCGGT GATCGACTTC
GGCACGAGCG GTGTCGGCGA CCCGGCGTGC GACCTCGTGA TCACCTGGGT GACGCTCACC
GGCGCCGCAC GGGAGGCGTT CCGCGCCGCG GTCGCGCAGG ACGCCGGGAC GTGGGCACGG
GCTCGCGGCT GGGGACTGTG GAAGGCGATG CTCCAGCTCA GCGGCAGGTC CCACACGCAC
CCGGATCAGG CTCCTGAAAT CGAGCGGGTC ATCAATGCCA TCCTCGACGA CCACGATCTG
CACAGCTGA
 
Protein sequence
MTTSARDGRA GIDASLVKRL ISAQFPHWSQ LPVTPVEFDG WDNRTYRLGS DMTVRLPTAA 
GYVAGVAKEN EWLPRLAPHL PLPIPQVLGA GVPGEGYPHP WSIRNWLPGS TLEFQDLADP
VEFATDLAAF LRALQNCDTT GGPLAGAHSF YRGTSPAYYD AETRDCLADL EGRIDVGRAT
EVWEAAVKSA WHGAPVWFHG DIATGNLLVQ NGRLSAVIDF GTSGVGDPAC DLVITWVTLT
GAAREAFRAA VAQDAGTWAR ARGWGLWKAM LQLSGRSHTH PDQAPEIERV INAILDDHDL
HS