Gene Caci_4199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4199 
Symbol 
ID8335553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4755914 
End bp4757173 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content73% 
IMG OID644957302 
Productamidohydrolase 
Protein accessionYP_003114904 
Protein GI256393340 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG AAGCCCTGAA GCTCTACTTC GACCTGCATC AGTACCCTGA GCTCGCCGGA 
GCCGAGAAGC GCACCGCGGC CCGGTTCGCC GACCGGCTGC GCCGATGCGG GCTCACGGTG
CGGACCGGTG TCGGCGGCCA CGGCGTGGTC GGCGTGCTGC ACAACGGCGC CGGGCCGGCG
GTGCTGCTGC GCGCCGAGTT GGACGCGCTG CCGATCGCCG AGCAGACCGG GCTCGCCTAC
GCCGCCGACG AGGCGCTGGG AGCGATGCAC GCCTGCGGGC ACGACGCGCA CCTGGCGTGC
CTGGCCGGAA CCGCAGAGCT GCTGGCGCGG CATCGTAGCA GTTGGCGCGG AACGCTGATC
GTCCTCGGGC AGCCGGCGGA GGAGGAGCTC TCCGGCGCCG CCGCGATGCT CGCCGACGGA
CTGTACGAGC GCTGCGGCCG CCCCGATGTC GCGCTCGCGC AGCACCTCAC GCCGCTGCCG
GCGGGCTGGG TCGCACATGC CCCGGGCGCG GTTACCGCCG CGAGCCGGCA GCTGGAGCTG
CGCGTGCACG GTCGCGGCGG TCATGCCGGA CTGCGGCAGT TCGCGGTGGA TCCGGTGCCG
GTGGCCGCCG CGATCGTGCT GGACGCGGCC GGGATCGGCG CGCGCCTGCC GGCTGCCGTC
ACCGTCGGCA CGATCTGCGG CGGCAGCCGT CCCAACGTCA TCCCGGAGGA GGTGACGCTC
GGTATCAGCG TGCGCGCGCC GACCACAGCG GTGCTCCAGG AGGCGGTCGC CGACCTGGTG
CGGATCGCGC AGCAGCACGC GCGCCGAGCC GGATGCCCTC GCCTGCCGGA GCTGTCGGTC
CTCTCCGCGT CCCCGGCCGG GGTGAACGAT CCGGTCGCCG GCCGCATCGT CCGGGAGGCG
CATCTGCCCC GCTTCGGATC AGGGCACGTG CTCACCCTGC CGCCGTCGCT GGCCACCGAC
GACTTCCCGC TGCTCACGCT GCCCGATTCG GCCGATCCGG TCCCGTCGGT CTACTGGATG
GTCGGTGCGA CCGCACCGGA GGTCTGGAGC CGTGCCGCCG GGACGTCGCT GGTCGAGAAG
GCCGCGAACG TGCCGGCCAA CCACAGCGCG GCGTTCGCCC CCGATCCGGT GCGGACTCTG
CGGACCGGCA TCGCCGCGAT GACCGAAGCG GCGCTCGCCT TCCTGACCCG TCAGCCATCT
CCAACGCTCA CCACGGTTTC CGACGACGTT CCCACCTCTG AAGGGATATC CGCATCATGA
 
Protein sequence
MLDEALKLYF DLHQYPELAG AEKRTAARFA DRLRRCGLTV RTGVGGHGVV GVLHNGAGPA 
VLLRAELDAL PIAEQTGLAY AADEALGAMH ACGHDAHLAC LAGTAELLAR HRSSWRGTLI
VLGQPAEEEL SGAAAMLADG LYERCGRPDV ALAQHLTPLP AGWVAHAPGA VTAASRQLEL
RVHGRGGHAG LRQFAVDPVP VAAAIVLDAA GIGARLPAAV TVGTICGGSR PNVIPEEVTL
GISVRAPTTA VLQEAVADLV RIAQQHARRA GCPRLPELSV LSASPAGVND PVAGRIVREA
HLPRFGSGHV LTLPPSLATD DFPLLTLPDS ADPVPSVYWM VGATAPEVWS RAAGTSLVEK
AANVPANHSA AFAPDPVRTL RTGIAAMTEA ALAFLTRQPS PTLTTVSDDV PTSEGISAS