Gene Caci_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4196 
Symbol 
ID8335550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4750858 
End bp4751667 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID644957299 
Producthypothetical protein 
Protein accessionYP_003114901 
Protein GI256393337 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.606827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.839395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACC GAAAATTTGT GCGTTCAGTG CTGATGGCGG TTCCTCTTGT TGCCGTCGGC 
AGTATGTCGG TGGCGTGCGC CTCGATGCAT TCTTCGAATA CTGCGAATGC CGCGGCGATA
CCGGAGGAAC AGGCTGTAGC GGCGGTCTCG ACGCAGATGC CGAGTGCCCC GGCGTCGCCG
TCGGCTTCTG CCAGCGAATC GTCATCGGCC AGTCCTGTCG TGAGCAGTCT GCCGGGCCTT
GGTTCGCACA CTCTGGCGGC GGTCCCCGCC TCAGCCCAGC AGGTGGTGCT TGCCGTGGGA
GGCGGCAAGA CCTCCTCGGA CGCGACGGTG CAGCTGTTCA CGAGAGTGCC AGGCGGATGG
CAGTCAGCCG CACCCGCATG GCCGGCCCAC AACGCGCTGC ACGGCTGGAC CGACGAGCAC
TACGCCAGCG ACCTGAAATC CCCGATCGGC GTCTACAACC TCACCGACGC CGGCGGTCTG
CTGCCCGATC CCGGAACCAA GCTGCACTAC ACGCAGTCCT CGCACTTCAC CATCAACGGA
ACCGGCTTCC GCGACGAGCC TTTGGCCGGC TCCTACGACT ACGTCATCGC CATCAACTAC
AACCGCGCGC CGGGCACCTC GCCGATGGAC CCGACCATGC CGATGGGCGC CGGCCGAGGC
GGCGGCATCT GGCTGCACGT CGACCACGGC GGTCCGACCC ACGCCTGCGT CAGCGTGCCC
AAGGACGACA TGAAGCAGCT GCTCCTGACG CTGGACCCGG CGCTGCACCC GGTCATCGTG
ATGGGAGACG GAGCCTCGCT GGCTCGCTGA
 
Protein sequence
MAHRKFVRSV LMAVPLVAVG SMSVACASMH SSNTANAAAI PEEQAVAAVS TQMPSAPASP 
SASASESSSA SPVVSSLPGL GSHTLAAVPA SAQQVVLAVG GGKTSSDATV QLFTRVPGGW
QSAAPAWPAH NALHGWTDEH YASDLKSPIG VYNLTDAGGL LPDPGTKLHY TQSSHFTING
TGFRDEPLAG SYDYVIAINY NRAPGTSPMD PTMPMGAGRG GGIWLHVDHG GPTHACVSVP
KDDMKQLLLT LDPALHPVIV MGDGASLAR