Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4196 |
Symbol | |
ID | 8335550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4750858 |
End bp | 4751667 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644957299 |
Product | hypothetical protein |
Protein accession | YP_003114901 |
Protein GI | 256393337 |
COG category | [S] Function unknown |
COG ID | [COG3786] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.606827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.839395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCACC GAAAATTTGT GCGTTCAGTG CTGATGGCGG TTCCTCTTGT TGCCGTCGGC AGTATGTCGG TGGCGTGCGC CTCGATGCAT TCTTCGAATA CTGCGAATGC CGCGGCGATA CCGGAGGAAC AGGCTGTAGC GGCGGTCTCG ACGCAGATGC CGAGTGCCCC GGCGTCGCCG TCGGCTTCTG CCAGCGAATC GTCATCGGCC AGTCCTGTCG TGAGCAGTCT GCCGGGCCTT GGTTCGCACA CTCTGGCGGC GGTCCCCGCC TCAGCCCAGC AGGTGGTGCT TGCCGTGGGA GGCGGCAAGA CCTCCTCGGA CGCGACGGTG CAGCTGTTCA CGAGAGTGCC AGGCGGATGG CAGTCAGCCG CACCCGCATG GCCGGCCCAC AACGCGCTGC ACGGCTGGAC CGACGAGCAC TACGCCAGCG ACCTGAAATC CCCGATCGGC GTCTACAACC TCACCGACGC CGGCGGTCTG CTGCCCGATC CCGGAACCAA GCTGCACTAC ACGCAGTCCT CGCACTTCAC CATCAACGGA ACCGGCTTCC GCGACGAGCC TTTGGCCGGC TCCTACGACT ACGTCATCGC CATCAACTAC AACCGCGCGC CGGGCACCTC GCCGATGGAC CCGACCATGC CGATGGGCGC CGGCCGAGGC GGCGGCATCT GGCTGCACGT CGACCACGGC GGTCCGACCC ACGCCTGCGT CAGCGTGCCC AAGGACGACA TGAAGCAGCT GCTCCTGACG CTGGACCCGG CGCTGCACCC GGTCATCGTG ATGGGAGACG GAGCCTCGCT GGCTCGCTGA
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Protein sequence | MAHRKFVRSV LMAVPLVAVG SMSVACASMH SSNTANAAAI PEEQAVAAVS TQMPSAPASP SASASESSSA SPVVSSLPGL GSHTLAAVPA SAQQVVLAVG GGKTSSDATV QLFTRVPGGW QSAAPAWPAH NALHGWTDEH YASDLKSPIG VYNLTDAGGL LPDPGTKLHY TQSSHFTING TGFRDEPLAG SYDYVIAINY NRAPGTSPMD PTMPMGAGRG GGIWLHVDHG GPTHACVSVP KDDMKQLLLT LDPALHPVIV MGDGASLAR
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