Gene Caci_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4183 
Symbol 
ID8335537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4737380 
End bp4737973 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content71% 
IMG OID644957286 
Productprotein of unknown function ATP binding 
Protein accessionYP_003114888 
Protein GI256393324 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.578204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.370098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTCCG TCAACTCATC TGAGGTCGCC TACCTGCCCG GGACCGTCAC CAGGTCCGTG 
AAGCTGCTCA TCGCCGGGCA CTTCGGGGCG GGCAAGACCA CTTTCGTGGG CAGCGTCTCG
GAAATCCGGC CTCTGCGGAC CGAGGAGCCG ATCACCGAGG CCAGCCTCGG CGTCGACGAC
CTGGCCGGAC TGCCGAAGAA GACCTCGACG ACGGTCGCCA TGGACTTCGG CCGCCGGACC
TTCGGCGACG TCGCGCTGTA CCTGTTCGGC ACGCCGGGAC AGCAGCGCTT CCTGCCGCTG
TGGGACGAGC TCGCCCGCGG CGCCGCCGGC GCGCTGGTGC TCGTCGACAC CCGGCGGCTG
GACCACGCCG ACGAGATCCT CAGCGCCGTG GAGAAGCGCG GCCTGCCCTA CACGGTCGCC
GTCAACCAGT TCGACGGCGC GCGCCGCTAC CCGCCCGAGC AGATCCGCGA GGCGCTGGAC
CTCGCCCCGA CCACGCCCCT GACCGTCTGC GACGCGCGCG ACCAGGCCTC CTCCGCCAAG
GCGCTGATCG TGCTCGTCGA ACACCTCACC AGCCGACCGG AGACGTTCGC GTGA
 
Protein sequence
MGSVNSSEVA YLPGTVTRSV KLLIAGHFGA GKTTFVGSVS EIRPLRTEEP ITEASLGVDD 
LAGLPKKTST TVAMDFGRRT FGDVALYLFG TPGQQRFLPL WDELARGAAG ALVLVDTRRL
DHADEILSAV EKRGLPYTVA VNQFDGARRY PPEQIREALD LAPTTPLTVC DARDQASSAK
ALIVLVEHLT SRPETFA