| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4180 |
|---|
| Symbol | |
|---|
| ID | 8335534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4735268 |
|---|
| End bp | 4736644 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644957283 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003114885 |
|---|
| Protein GI | 256393321 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.412198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.250223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCTG AGATAGCGCT GTGGTGCACG GCCGTCGCCC TCGTCGTCGC GATAGCGGCA
GCGGTCTATT GGGCCCGCGG CGCCGCTCGG CTGCGGACGA GGATCGCCGG ATTGGAAGAG
GCCTGCGAGG CTCGGGATGC CGCGGTGGCA CAGCTGGTTT CCGCGACGCT TCCCTCGGCA
TCGGACGTCC TGAGTGATTC CCCCGCAGCC AGTTCGGCTG TCGCCGTGGC TCCGGTCCTG
GACCGCACCG CCTTCGCCGG GGATATCGGA GTCCTGACAC AGCGGTACAC CACCGGCATT
CGCGACATGC AGCGCGACGT CGCCGAAGCA GTGCGCAAGC GCGTCGAAGA CGAGGCGCAT
CAGACCACTG AGTCCGCTGT GCGCTCCTTC GCCGAGACCG TGGTGAGCCT CGGAGCGAAC
CTGAGCAAGG TCGTCGCCGA GGCGATGCGG CAGCACCGGG GCGACGCGAC CTTCGAAACC
CTGACGCTCA TCGACCACAC CGTCCAGCAA ATGATCCGAC AGGCCCAGTC GTACGTTGTG
GTCTGTGGCG GCCTGCCCGG CCGGCGCTGG CCGGCCCAAC CGATGACTGA CGTGGTACGC
GGCGCGATGG GACGGATCCA GGACTACCAG CGGATCCGTC CGCGCGAACT GCCTCGTCAG
GTGGTCGGGC AGGCCGTCGA ACCCGCCGTG CACGCGGTCG CCACGCTGCT GGACAACGCC
GCGCGCTACT CCCCGCCCGG ATCCTTCGTG GACGTCACGT TCCAAGAGGG CCACCACGGC
GTCACGATCA TCGTCGACGA CGCGGGCGTG GGCATGAACA GCGAGCAGCT GGACGCCGCA
CGCCGCATCC TGTCCGGCCA GGAGCCGGTC GACCTGCACC GCCTCGGCCC GCACCCGAAG
ATCGGCTTCC CGACGGTCGC CGCGCTGAGC CGGCGCTACG GATTCCAGGC GTCCATCGAC
GGATCCGGCA GCCCGTTCGG CGGGACGCGC GCGGCGCTGT TCATCCCCGA ATCCCTGCTT
GCCGCAGAAG TTCCGATCGA CCAGGGCGAG GCGCCCGAGG CGGCGCCGGC CGAGGTCATG
GAGACGACCG ACACCGGGCT GCCGCGCCGC AAGCGGCACA TCGCCACCGT CGACACCCAG
CCGCTCCCGC CGGTGCTGAG CGCTTCGCCC CCGCGCGCCA GCATCGCCGC GGCTTGGCAA
AGCGGAGCCC ACAGCACCGG GACCGGCGGC GACACCCGCA CCGGAAGTGG CTCCGGCAGC
GAATCTGGCA GCACCACCGG CACTGGTACC CCCACCCCCA CCGGCGCCGG CACGGACCGC
GACACCGGTA CCGGCCGCCA GGACTCGCCC TCCGACCCCG CAGAAGGGAC TCGATAG
|
|---|
| Protein sequence | MNAEIALWCT AVALVVAIAA AVYWARGAAR LRTRIAGLEE ACEARDAAVA QLVSATLPSA
SDVLSDSPAA SSAVAVAPVL DRTAFAGDIG VLTQRYTTGI RDMQRDVAEA VRKRVEDEAH
QTTESAVRSF AETVVSLGAN LSKVVAEAMR QHRGDATFET LTLIDHTVQQ MIRQAQSYVV
VCGGLPGRRW PAQPMTDVVR GAMGRIQDYQ RIRPRELPRQ VVGQAVEPAV HAVATLLDNA
ARYSPPGSFV DVTFQEGHHG VTIIVDDAGV GMNSEQLDAA RRILSGQEPV DLHRLGPHPK
IGFPTVAALS RRYGFQASID GSGSPFGGTR AALFIPESLL AAEVPIDQGE APEAAPAEVM
ETTDTGLPRR KRHIATVDTQ PLPPVLSASP PRASIAAAWQ SGAHSTGTGG DTRTGSGSGS
ESGSTTGTGT PTPTGAGTDR DTGTGRQDSP SDPAEGTR
|
|---|
| |