Gene Caci_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4173 
Symbol 
ID8335527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4728613 
End bp4729335 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID644957276 
Producthypothetical protein 
Protein accessionYP_003114878 
Protein GI256393314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.579541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.287297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA CCCTCGAATA CGTGATAGGC AGCCGGGTCC GGTGTGCCGG GGACGAGTGC 
GGCGAGGTGG AGTTCGTGGT CGTCGACCCG GTGGCGGACA AGCTCACCCA CCTTGTGGTG
CGGCCGGACG ACGGCGGGCA GGCCCGTCTG GTGCCGGTGC ACATCGCCGT CCCCGGTCCG
GAGGGCGTCG ATCTGAACTG CACGCGTGCC CGGTTCGAGG AGTTCGAACC GGCGCTGCAG
ACCTATTTCA TGCCCGACAT CGAGCGCGTC GGGCCCGCCC GCGAGGAGCG GGTGCTGGCT
TGGCCGCTGT ACGGGCTGGT GATGACCCCG ACCGCGCTGA CCGGTTTCGT GCCGGGCGTG
GATCCGCAGC TGGCTGCCAC GACCGTGGAG CACATCCCGG CCGGCGAGGT CAGCGTGCGC
CGCGGTGAGC GCGTGCACGC CGACGGCGGC GGCGAGGTCG GGCGCGTGCA GGGTCTGGTG
GTCGCGCCGC CGGACAGCGA GGTGACCCAT GTGCTGCTGG ACGAGGGGCA CCTGTGGGGA
CGCAAGCGGG TCGCCATCCC GATTCAGGAC GTGCTCGGGA TCGACGCCGC CGGCGTGTCT
GTCGGGCTGA CCAAGGAGCA GATCAAGGAG CTGCCGCCGG TGGACGTCGA CGGTCTGGCG
GCGGAGTCGG GTGAGGATGA GGGCGACGGC GAGGGTCAGC AGGCGCCTGC GCAAGGCGGC
TGA
 
Protein sequence
MQATLEYVIG SRVRCAGDEC GEVEFVVVDP VADKLTHLVV RPDDGGQARL VPVHIAVPGP 
EGVDLNCTRA RFEEFEPALQ TYFMPDIERV GPAREERVLA WPLYGLVMTP TALTGFVPGV
DPQLAATTVE HIPAGEVSVR RGERVHADGG GEVGRVQGLV VAPPDSEVTH VLLDEGHLWG
RKRVAIPIQD VLGIDAAGVS VGLTKEQIKE LPPVDVDGLA AESGEDEGDG EGQQAPAQGG