Gene Caci_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4168 
Symbol 
ID8335522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4719804 
End bp4720391 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content70% 
IMG OID644957271 
Producthypothetical protein 
Protein accessionYP_003114873 
Protein GI256393309 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0881208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0325962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAGCA TCTGCGTCTT CTCCGGCTCG TCGCACGGAC GCGGCGAGCG CTACCTCCAC 
CACGCCGAGC AGCTCGGCGC CGCCCTTGCC GCGCGCGGCA TCGCCGTCGT CTACGGCGGC
GCCCGCGTCG GCACGATGGG TGCGCTCGCC GACGGCGCCC TGCGGGCCGG CGGACGCGTC
GTGGGCGTCA TCCCGCGCTC GCTTTATGAG TGGGAGGTCG CGCACGAGGG CCTGACCGAG
CTGCACATCG CCGAGGACCT GCACCAGCGC AAAGCCCTGA TGGCCGAGCG CGCCGACGCC
TTCATCGCCC TGCCCGGCGG CTCGGGCACG CTGGAGGAGC TGTTCGAGAT CTGGACCTGG
GGTCAGATCG GGCTGCACAC CAAACCGGTC GGTCTGCTCG ACGTCGCCGA CTACTTCACC
CCGCTGGTCG CCTTCCTGGA CCACATGACC GGCGAGGGCT TCCTGCACCA GCCGCACCGC
GACATGCTGA TCGTCGAGAC GGATCTCGAC GTGCTCCTGG AGCGCTTCGC CGCCTACCAG
CCGCCGGAAT ACGTCTGGCG CGAGAACCCG ACCGAGCCGG GTGAATAA
 
Protein sequence
MLSICVFSGS SHGRGERYLH HAEQLGAALA ARGIAVVYGG ARVGTMGALA DGALRAGGRV 
VGVIPRSLYE WEVAHEGLTE LHIAEDLHQR KALMAERADA FIALPGGSGT LEELFEIWTW
GQIGLHTKPV GLLDVADYFT PLVAFLDHMT GEGFLHQPHR DMLIVETDLD VLLERFAAYQ
PPEYVWRENP TEPGE