Gene Caci_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4165 
Symbol 
ID8335519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4712688 
End bp4713773 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content71% 
IMG OID644957268 
Productmycothiol-dependent formaldehyde dehydrogenase 
Protein accessionYP_003114870 
Protein GI256393306 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR03451] mycothiol-dependent formaldehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.356272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0548986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGG TGAAGGCAGT CATCGCCCGG TCCGAGGGCG CGCCGGTCGA GATCGTCACG 
ATCACCGTGC CGGATCCCGG GCCCGGCGAG GCCGTGGTCC GGGTGCAGTC CTGCGGGGTG
TGCCACACCG ACCTGCACTA CCGGGAAGGG GGCATCAACG ACGAGTTCCC GTTCCTGCTC
GGGCACGAGG CCTCCGGCAT CGTGGAGGCG GTCGGTCCGG ACGTGACCGA GGTGCAGCCC
GGGGACTTCG TGGTGCTGAA CTGGCGCGCG GTGTGCGGGC AGTGCCGGGC GTGCCGGCGC
GGCGAGCCCT GGTACTGCTT CGCCACGCAC AACGCGAAGC AGAAGATGAC GTTGGAGGAC
GGTACGGAGC TGACCCCGGC CCTGGGCATC GGCGCGTTCG CCGAGAAGAC GCTGGTCGCG
GCGGGTCAGT GCACGAAGGT GGACCCCAGC GCGCGCCCGG CGGCGGTCGG GCTGCTCGGC
TGCGGGGTGA TGGCGGGCAT CGGCGCGGCC GTCAACACCG GCAATGTCAC GCGCGGCAAG
TCGGTGGCGG TGATCGGCTG CGGCGGGGTC GGCGTGGCCG CGATCGCCGG ATCGGCGCTG
GCCGGCGCGA ATCCGATCAT CGCAGTGGAC ATCGATGCCA AGAAGCTGGC GACAGCCACC
CGGCTCGGCG CCACGCACAC CGTCGACTCC TCGGCCGTCG ATCCGGTCGC CGCGATCCAG
GAGCTGACCG GCGGGTTCGG CGCGGACGTG GTGATCGAGG CGGTCGGGCG TCCCGAGACG
TGGAAGCAGG CGTTCTACGC GCGCGACCTG GCCGGCACGG TGGTGCTCGT CGGCGTGCCG
ACGCCGCAGA TGCGGATCCC GGACCTGCCG CTGATCGACG TCTTCGGGCG CGGTGGCGCG
CTGAAGTCCA GCTGGTACGG CGACTGCCTG CCCAGCCGCG ACTTCCCCGT GCTCGTCGAC
CTCTACCAGC GCGGCAAGCT CGACCTGGAC GCGTTCGTCA GCGAGGAGAT CGCGCTGACG
GACATCGAGG CGGCGTTCGA GCGCATGCAG CGCGGCGAGG TTCTGCGCTC GGTGGTGATC
CTGTGA
 
Protein sequence
MQQVKAVIAR SEGAPVEIVT ITVPDPGPGE AVVRVQSCGV CHTDLHYREG GINDEFPFLL 
GHEASGIVEA VGPDVTEVQP GDFVVLNWRA VCGQCRACRR GEPWYCFATH NAKQKMTLED
GTELTPALGI GAFAEKTLVA AGQCTKVDPS ARPAAVGLLG CGVMAGIGAA VNTGNVTRGK
SVAVIGCGGV GVAAIAGSAL AGANPIIAVD IDAKKLATAT RLGATHTVDS SAVDPVAAIQ
ELTGGFGADV VIEAVGRPET WKQAFYARDL AGTVVLVGVP TPQMRIPDLP LIDVFGRGGA
LKSSWYGDCL PSRDFPVLVD LYQRGKLDLD AFVSEEIALT DIEAAFERMQ RGEVLRSVVI
L